RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 F8VZ95 297 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 TSPAN8P19075 237 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 YWHAQP27348 245 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 C21orf59P57076 290 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 FASTKQ14296 549 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 CLPBQ9H078 707 aa17.23■□□□□ 0.35
TSPAN3-201ENST00000267970 SP100P23497 879 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 TSGA10IPQ3SY00 556 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 GNASQ5JWF2 1037 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 OOSP2Q86WS3 158 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 MIEF1Q9NQG6 463 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 OPLAHO14841 1288 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 LRG1P02750 347 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 PCSK1P29120 753 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 TALDO1P37837 337 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 GRIK3Q13003 919 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 MPP3Q13368 585 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 SLITRK1Q96PX8 696 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 APBA2Q99767 749 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 IL1RAPL1Q9NZN1 696 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF284Q2VY69 593 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 KRT73Q86Y46 540 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 DCP1BQ8IZD4 617 aaKnown RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 BTBD10Q9BSF8 475 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 LBPP18428 481 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 NCKAP1LP55160 1127 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ADARP55265 1226 aaKnown RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 CEP44Q9C0F1 390 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ACTR8Q9H981 624 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 CRYL1Q9Y2S2 319 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 SLC12A8A0AV02 714 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 CLOCKO15516 846 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 GLP2RO95838 553 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ALDH5A1P51649 535 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ADGRF2Q8IZF7 708 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 OXNAD1Q96HP4 312 aaPredicted RBP17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 TCF7L2Q9NQB0 619 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 VPS28Q9UK41 221 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 NUDT5Q9UKK9 219 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
TSPAN3-201ENST00000267970 CCDC154A6NI56 674 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 PROCP04070 461 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 FASP25445 335 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 PRKCQQ04759 706 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 SNX32Q86XE0 403 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 TIPINQ9BVW5 301 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ELOVL6Q9H5J4 265 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ADGRA3Q8IWK6 1321 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 SASH3O75995 380 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 SEMA3DO95025 777 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 RARGP13631 454 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 KYQ8NBH2 561 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 FBXO30Q8TB52 745 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ENKURQ8TC29 256 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 HNRNPLLQ8WVV9 542 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 C19orf60Q96EN9 201 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 SERAC1Q96JX3 654 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 TMEM165Q9HC07 324 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 KLHL3Q9UH77 587 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 L1RE1Q9UN81 338 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 CNTNAP2Q9UHC6 1331 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 PIK3CDO00329 1044 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 H2AFXP16104 143 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 BTN2A1Q7KYR7 527 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ENGASEQ8NFI3 743 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 GTF3C4Q9UKN8 822 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 DYRK1BQ9Y463 629 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ZBTB11O95625 1053 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 STIP1P31948 543 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 RPA3P35244 121 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 GRK3P35626 688 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 MILR1Q7Z6M3 343 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 CYP4Z1Q86W10 505 aa17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 IPCEF1Q8WWN9 437 aaPredicted RBP17.21■□□□□ 0.35
TSPAN3-201ENST00000267970 ETS2P15036 469 aa17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 C4BPBP20851 252 aa17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.34
TSPAN3-201ENST00000267970 DOK6Q6PKX4 331 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms