RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 BSPRYQ5W0U4 402 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 CST9Q5W186 159 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 CASC4Q6P4E1 433 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 AGR3Q8TD06 166 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 NR1H4Q96RI1 486 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 SH3BP1Q9Y3L3 701 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 KCNA4P22459 653 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 AQP4P55087 323 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 DEUP1Q05D60 604 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 EMC2Q15006 297 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 GSTA3Q16772 222 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 TMEM130Q8N3G9 435 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 WDTC1Q8N5D0 677 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 OR6Y1Q8NGX8 325 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 RHBDL2Q9NX52 303 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 MYO18AQ92614 2054 aaKnown RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 DNAJC25-GNG10A0A024R161 153 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 CSDE1O75534 798 aaKnown RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 OATP04181 439 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 PEX2P28328 305 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 MIPP30301 263 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 ATXN3P54252 364 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 CDH8P55286 799 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 LGSNQ5TDP6 509 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 FASTKD5Q7L8L6 764 aaKnown RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 SATL1Q86VE3 508 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 CDHR1Q96JP9 859 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 DMAP1Q9NPF5 467 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 DNAJC16Q9Y2G8 782 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 WDR81Q562E7 1941 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 F8W8V4 182 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 CREB3O43889 395 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 ATG7O95352 703 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 OSBPP22059 807 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 ICAM3P32942 547 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 IGBP1P78318 339 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 RAB6CQ53S08 254 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 TRMT10BQ6PF06 316 aaKnown RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 MYLK4Q86YV6 388 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-230ENST00000552960 RAB6CQ9H0N0 254 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 ARHGAP28Q9P2N2 729 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 SOX13Q9UN79 622 aa12.79□□□□□ -0.36
HDAC7-230ENST00000552960 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 ADORA2AP29274 412 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 CDK7P50613 346 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 STAT5BP51692 787 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 MRPS5P82675 430 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 DLG1Q12959 904 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 EFHC1Q5JVL4 640 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 MARK2Q7KZI7 788 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 THNSL1Q8IYQ7 743 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 C3orf70A6NLC5 250 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 E7ESA3 106 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 VWA5B1Q5TIE3 1220 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 WDR75Q8IWA0 830 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 SLC17A6Q9P2U8 582 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
HDAC7-230ENST00000552960 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
HDAC7-230ENST00000552960 APOC4-APOC2K7ER74 178 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 APOC2P02655 101 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 TXNP10599 105 aaKnown RBP12.77□□□□□ -0.36
HDAC7-230ENST00000552960 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.36
HDAC7-230ENST00000552960 KRT81Q14533 505 aa12.77□□□□□ -0.36
HDAC7-230ENST00000552960 DHDDSQ86SQ9 333 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms