RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CAMKK1Q8N5S9 505 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 NAT16Q8N8M0 369 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RPLP0P6Q8NHW5 317 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ZNF606Q8WXB4 792 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 EZH1Q92800 747 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SECISBP2LQ93073 1101 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CFAP54Q96N23 3096 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ZSWIM1Q9BR11 485 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CNGB3Q9NQW8 809 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 OLA1Q9NTK5 396 aaKnown RBP10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MARCH2Q9P0N8 246 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 STRIP2Q9ULQ0 834 aa10.2□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SLC12A8A0AV02 714 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 M0QYV0 167 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 HOXC11O43248 304 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MED7O43513 233 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 FBXO21O94952 628 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 HMBSP08397 361 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 USP8P40818 1118 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RGS7P49802 495 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DMWDQ09019 674 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ARHGAP44Q17R89 818 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 C2orf27AQ580R0 203 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 HEATR6Q6AI08 1181 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GJB7Q6PEY0 223 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 Q6ZNB5 142 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RBM43Q6ZSC3 357 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TPGS1Q6ZTW0 290 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SYT13Q7L8C5 426 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BHLHA9Q7RTU4 235 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 WDR5BQ86VZ2 330 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ENOX1Q8TC92 643 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 USP33Q8TEY7 942 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RNF139Q8WU17 664 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 IRGQQ8WZA9 623 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RUBCNQ92622 972 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ACDQ96AP0 544 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 XPO6Q96QU8 1125 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TUBGCP2Q9BSJ2 902 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 EPC1Q9H2F5 836 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 NDST4Q9H3R1 872 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ARHGEF4Q9NR80 690 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ABCC13Q9NSE7 274 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SAMSN1Q9NSI8 373 aaKnown RBP10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MARK1Q9P0L2 795 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DEC1Q9P2X7 70 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 APEX2Q9UBZ4 518 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RAB23Q9ULC3 237 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 NUP205Q92621 2012 aa10.19□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GON4LQ3T8J9 2241 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TBC1D3BA6NDS4 549 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 YJEFN3A6XGL0 299 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 KCNJ18B7U540 433 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 E7ENQ6 273 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PIK3R2O00459 728 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TULP3O75386 442 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 LETM1O95202 739 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 KLKB1P03952 638 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 EEF1GP26641 437 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GNA15P30679 374 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CHKAP35790 457 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GPD2P43304 727 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ACADSBP45954 432 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SEC13P55735 322 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DAOAP59103 153 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SIM2Q14190 667 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 KCNJ12Q14500 433 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DMC1Q14565 340 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MEA1Q16626 185 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 KLHL40Q2TBA0 621 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 HSP90AA4PQ58FG1 418 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 MIIPQ5JXC2 388 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SASS6Q6UVJ0 657 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 ETFBKMTQ8IXQ9 262 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 EDEM1Q92611 657 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BBS2Q9BXC9 721 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 SIX2Q9NPC8 291 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 POLR3BQ9NW08 1133 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 DNAJC12Q9UKB3 198 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 HBS1LQ9Y450 684 aaKnown RBP10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PI4KAP42356 2102 aa10.18□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BECN2A8MW95 431 aa10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 BHMG1C9JSJ3 638 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 NEDD8-MDP1E9PL57 170 aa10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 FOXN3O00409 490 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 THAP12O43422 761 aa10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 CISD3P0C7P0 127 aa10.17□□□□□ -0.78
TNFRSF1A-214ENST00000543048 TYRP14679 529 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms