RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SENP8Q96LD8 212 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 QKIQ96PU8 341 aaKnown RBP eCLIP14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 CSPG4P5Q96PW8 444 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 PAFAH2Q99487 392 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 LRRC4Q9HBW1 653 aa14.27□□□□□ -0.12
LDLRAD3-202ENST00000524419 GABRDO14764 452 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 ASMTLO95671 621 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 RPLP2P05387 115 aaKnown RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 THP07101 528 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 CTGFP29279 349 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 SLC8A1P32418 973 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 GBP2P32456 591 aaPredicted RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 ARL4AP40617 200 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 MSH2P43246 934 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 FCGRTP55899 365 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 NCALDP61601 193 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 MRPS5P82675 430 aaKnown RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 MTM1Q13496 603 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 PREPLQ4J6C6 727 aaPredicted RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 RGS9BPQ6ZS82 235 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 PSTKQ8IV42 348 aaKnown RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 DENND1AQ8TEH3 1009 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 GAD1Q99259 594 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 CYTH2Q99418 400 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 DHRS4Q9BTZ2 278 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 ECT2Q9H8V3 914 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 KRT82Q9NSB4 513 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 ETNK2Q9NVF9 386 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 MTMR10Q9NXD2 777 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 DDX43Q9NXZ2 648 aaKnown RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 KLHL14Q9P2G3 628 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 RCOR3Q9P2K3 495 aaPredicted RBP14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 FZD10Q9ULW2 581 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 STAP1Q9ULZ2 295 aa14.27□□□□□ -0.13
LDLRAD3-202ENST00000524419 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 MAP3K6O95382 1288 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 ATP6V1G2O95670 118 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 PGK1P00558 417 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 FOXN2P32314 431 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 MAGEA6P43360 314 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 LHX1P48742 406 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 WDR4P57081 412 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 YWHAZP63104 245 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 GBE1Q04446 702 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 CBLBQ13191 982 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 SPARCL1Q14515 664 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 DCAF6Q58WW2 860 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 SYCP2LQ5T4T6 812 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 WLSQ5T9L3 541 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 CGB2Q6NT52 195 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 DSTYKQ6XUX3 929 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 CLEC20AQ6ZU45 233 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 SERINC5Q86VE9 423 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 C4orf33Q8N1A6 199 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 TACO1Q9BSH4 297 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 PITPNM3Q9BZ71 974 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 KIF9Q9HAQ2 790 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 SSU72Q9NP77 194 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 TEX264Q9Y6I9 313 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 ZNF638Q14966 1978 aaKnown RBP14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 TSC2P49815 1807 aa14.26□□□□□ -0.13
LDLRAD3-202ENST00000524419 KBTBD13C9JR72 458 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 GCATO75600 419 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 FBXO21O94952 628 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CHRNA1P02708 482 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 NQO1P15559 274 aaKnown RBP14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 NOS2P35228 1153 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 FAXCQ5TGI0 409 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 NCBP2-AS2Q69YL0 99 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 PAQR9Q6ZVX9 377 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CCDC110Q8TBZ0 833 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 DCAKDQ8WVC6 231 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 TRIB2Q92519 343 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 NDRG1Q92597 394 aaKnown RBP14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 LPPQ93052 612 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 WNT8BQ93098 351 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 YY1AP1Q9H869 796 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CRTAC1Q9NQ79 661 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CACNG4Q9UBN1 327 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 GIT1Q9Y2X7 761 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 STARD13Q9Y3M8 1113 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 ARL5CA6NH57 179 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 H3BRJ5 948 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 GPR182O15218 404 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 GOT1P17174 413 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CA4P22748 312 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 SKIV2L2P42285 1042 aaKnown RBP14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 CLCNKBP51801 687 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 MAP3K7CLP57077 242 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 MGAT3Q09327 533 aa14.25□□□□□ -0.13
LDLRAD3-202ENST00000524419 BZW1Q7L1Q6 419 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms