RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 SIX2Q9NPC8 291 aa19.12■□□□□ 0.65
TFF3-204ENST00000518498 A8MXQ7 604 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 CDX4O14627 284 aaPredicted RBP19.11■□□□□ 0.65
TFF3-204ENST00000518498 SCAMP3O14828 347 aaKnown RBP19.11■□□□□ 0.65
TFF3-204ENST00000518498 NRDCO43847 1150 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 ADH1CP00326 375 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 CEACAM1P13688 526 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 YWHAQP27348 245 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 TNFRSF4P43489 277 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 CACNA2D1P54289 1103 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 MYL6P60660 151 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 ZNF667Q5HYK9 610 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 EOGTQ5NDL2 527 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 EMC10Q5UCC4 262 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 DPY19L2P1Q6NXN4 242 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 LPCAT2Q7L5N7 544 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 SPAG5Q96R06 1193 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 B3GNT5Q9BYG0 378 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 ZNF518BQ9C0D4 1074 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 DPEP3Q9H4B8 488 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 ARHGEF4Q9NR80 690 aa19.11■□□□□ 0.65
TFF3-204ENST00000518498 HELZP42694 1942 aaKnown RBP19.11■□□□□ 0.65
TFF3-204ENST00000518498 E2F8A0AVK6 867 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 SGK1O00141 431 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 CLDN5O00501 218 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 MFAP3LO75121 409 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 RTN3O95197 1032 aaPredicted RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 ADH5P11766 374 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 HNRNPLP14866 589 aaKnown RBP eCLIP19.1■□□□□ 0.65
TFF3-204ENST00000518498 CSRP1P21291 193 aaKnown RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 CASP14P31944 242 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 KRT9P35527 623 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 P2RY2P41231 377 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 GRIA2P42262 883 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 YWHAEP62258 255 aaKnown RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 GAD2Q05329 585 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 ZNF252P-AS1Q0IIN9 211 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 LRMPQ12912 555 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 BYSLQ13895 437 aaKnown RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 SFTPA1Q8IWL2 248 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 PPM1KQ8N3J5 372 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 PDZD8Q8NEN9 1154 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 WHAMMQ8TF30 809 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 CPLX3Q8WVH0 158 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 RLN3Q8WXF3 142 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 OVCA2Q8WZ82 227 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 SPACA7Q96KW9 195 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 STK33Q9BYT3 514 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 NIF3L1Q9GZT8 377 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 UBE2TQ9NPD8 197 aaPredicted RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 BCCIPQ9P287 314 aaKnown RBP eCLIP19.1■□□□□ 0.65
TFF3-204ENST00000518498 NXF1Q9UBU9 619 aaKnown RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 CHORDC1Q9UHD1 332 aaPredicted RBP19.1■□□□□ 0.65
TFF3-204ENST00000518498 DNAJC12Q9UKB3 198 aa19.1■□□□□ 0.65
TFF3-204ENST00000518498 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 TNFRSF10BO14763 440 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 CCDC172P0C7W6 258 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 KIR2DL1P43626 348 aaPredicted RBP19.09■□□□□ 0.65
TFF3-204ENST00000518498 MESP2Q0VG99 397 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 LMAN2Q12907 356 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 FOXC1Q12948 553 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 RAPGEF1Q13905 1077 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 UAP1L1Q3KQV9 507 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 CCDC186Q7Z3E2 898 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 C12orf40Q86WS4 652 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 TMEFF1Q8IYR6 380 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 PGBD3Q8N328 593 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 TTC39CQ8N584 583 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 B3GALNT2Q8NCR0 500 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 OR8K1Q8NGG5 319 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 SYN2Q92777 582 aaPredicted RBP19.09■□□□□ 0.65
TFF3-204ENST00000518498 FBXO32Q969P5 355 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 OTUB2Q96DC9 234 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 NAA15Q9BXJ9 866 aaKnown RBP19.09■□□□□ 0.65
TFF3-204ENST00000518498 XYLT2Q9H1B5 865 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 NLRC4Q9NPP4 1024 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 TMEM30AQ9NV96 361 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 ZNHIT6Q9NWK9 470 aaKnown RBP19.09■□□□□ 0.65
TFF3-204ENST00000518498 EVLQ9UI08 416 aaPredicted RBP19.09■□□□□ 0.65
TFF3-204ENST00000518498 FHOD1Q9Y613 1164 aa19.09■□□□□ 0.65
TFF3-204ENST00000518498 THADAQ6YHU6 1953 aa19.08■□□□□ 0.65
TFF3-204ENST00000518498 EPHB6O15197 1021 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 STAT1P42224 750 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 KDSRQ06136 332 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 CUL2Q13617 745 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 ARID5BQ14865 1188 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 PREPLQ4J6C6 727 aaPredicted RBP19.08■□□□□ 0.64
TFF3-204ENST00000518498 TRIM61Q5EBN2 209 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 HECTD3Q5T447 861 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 BTBD8Q5XKL5 378 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 RRAGAQ7L523 313 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 ARHGEF19Q8IW93 802 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 FRMD1Q8N878 549 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 HMGB4Q8WW32 186 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 TATDN2Q93075 761 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 PANX2Q96RD6 677 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 KCNK16Q96T55 309 aa19.08■□□□□ 0.64
TFF3-204ENST00000518498 NUSAP1Q9BXS6 441 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms