RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 BMT2Q1RMZ1 405 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 DLK2Q6UY11 383 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 MSL3Q8N5Y2 521 aaKnown RBP6.56□□□□□ -1.36
NFKB1-203ENST00000502367 CSGALNACT2Q8N6G5 542 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 CLRN3Q8NCR9 226 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 HOOK2Q96ED9 719 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 CCDC51Q96ER9 411 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 ZNF503Q96F45 646 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 CDK5RAP3Q96JB5 506 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 HIST1H2AHQ96KK5 128 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 HIST1H2AJQ99878 128 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 REEP2Q9BRK0 252 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 MXRA8Q9BRK3 442 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 TUBGCP2Q9BSJ2 902 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 DESI2Q9BSY9 194 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 GTPBP4Q9BZE4 634 aaKnown RBP6.56□□□□□ -1.36
NFKB1-203ENST00000502367 NT5C3AQ9H0P0 336 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 RAVER2Q9HCJ3 691 aaKnown RBP6.56□□□□□ -1.36
NFKB1-203ENST00000502367 ABHD10Q9NUJ1 306 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 RGL1Q9NZL6 768 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
NFKB1-203ENST00000502367 MAPRE3Q9UPY8 281 aa6.56□□□□□ -1.36
NFKB1-203ENST00000502367 PHLPP2Q6ZVD8 1323 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 BICDL2A1A5D9 508 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 VSIG10L2P0DP72 767 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TACR2P21452 398 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CASRP41180 1078 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 BACE1P56817 501 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CYP4A11Q02928 519 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 UBXN1Q04323 297 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 LRRC63Q05C16 580 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TRAF1Q13077 416 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 STIM1Q13586 685 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TRIM14Q14142 442 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CTTNQ14247 550 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 SYCP1Q15431 976 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 PTPN14Q15678 1187 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 MEA1Q16626 185 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 FILIP1LQ4L180 1135 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CEP55Q53EZ4 464 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 DNTTIP2Q5QJE6 756 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 HAUS3Q68CZ6 603 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 RINT1Q6NUQ1 792 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 C1orf186Q6ZWK4 172 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 NIPA1Q7RTP0 329 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 C11orf74Q86VG3 221 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 SFR1Q86XK3 245 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 APOBEC3FQ8IUX4 373 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 MYOCDQ8IZQ8 938 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 ACRBPQ8NEB7 543 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 ANKRD7Q92527 254 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 USP7Q93009 1102 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 ZKSCAN4Q969J2 545 aaPredicted RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CCDC47Q96A33 483 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 EEF2KMTQ96G04 330 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 PLEKHG4BQ96PX9 1271 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TAAR1Q96RJ0 339 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 WDR24Q96S15 920 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CHP1Q99653 195 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 STRA6Q9BX79 667 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 LRRC27Q9C0I9 530 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 RPAP3Q9H6T3 665 aaPredicted RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 TUFT1Q9NNX1 390 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 GGA3Q9NZ52 723 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 ING1Q9UK53 422 aaPredicted RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CCPG1Q9ULG6 757 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 CAPN11Q9UMQ6 739 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 NOC2LQ9Y3T9 749 aaKnown RBP6.55□□□□□ -1.36
NFKB1-203ENST00000502367 RIPK3Q9Y572 518 aa6.55□□□□□ -1.36
NFKB1-203ENST00000502367 ASTN1O14525 1302 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 PMS2P1A4D2B8 440 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 VWA5AO00534 786 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 ALDH1A2O94788 518 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 MYBP10242 640 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 ALAS1P13196 640 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 IDEP14735 1019 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 MUTP22033 750 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 ZNF131P52739 623 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 SETQ01105 290 aaPredicted RBP6.54□□□□□ -1.36
NFKB1-203ENST00000502367 NCBP1Q09161 790 aaKnown RBP6.54□□□□□ -1.36
NFKB1-203ENST00000502367 MGAT5Q09328 741 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 PGM5Q15124 567 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 ELAVL1Q15717 326 aaKnown RBP6.54□□□□□ -1.36
NFKB1-203ENST00000502367 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 GPR158Q5T848 1215 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 SYT10Q6XYQ8 523 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 CNGA4Q8IV77 575 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 CCDC65Q8IXS2 484 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 CMTM4Q8IZR5 234 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 DAW1Q8N136 415 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 GPC2Q8N158 579 aa6.54□□□□□ -1.36
NFKB1-203ENST00000502367 SAMD3Q8N6K7 520 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms