RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 GALCP54803 685 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 GPC5P78333 572 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 RING1Q06587 406 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 MAMLD1Q13495 774 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 TDGQ13569 410 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 MTF1Q14872 753 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 TRIP4Q15650 581 aaPredicted RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 HTR3DQ70Z44 454 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 RNF135Q8IUD6 432 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 ST13P5Q8NFI4 369 aaPredicted RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 PLD4Q96BZ4 506 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 ZNF653Q96CK0 615 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 PGAP3Q96FM1 320 aaPredicted RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 UHRF1Q96T88 793 aaPredicted RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 MRPL47Q9HD33 250 aaKnown RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 SPTLC3Q9NUV7 552 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 THG1LQ9NWX6 298 aaKnown RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 SCINQ9Y6U3 715 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 KIF26AQ9ULI4 1882 aaPredicted RBP20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 C2CD4BA6NLJ0 364 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 EIF3CLB5ME19 914 aaKnown RBP20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 ZNF263O14978 683 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 CHADO15335 359 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 GREM1O60565 184 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 IGLV3-27P01718 113 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 H2AFZP0C0S5 128 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 ABCB4P21439 1286 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 GBP1P32455 592 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 RFC1P35251 1148 aaPredicted RBP20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 SLC25A52Q3SY17 297 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 ARHGAP29Q52LW3 1261 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 TRNP1Q6NT89 227 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 H2AFVQ71UI9 128 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 BNIPLQ7Z465 357 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 TAC4Q86UU9 113 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 JOSD2Q8TAC2 188 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 RXFP2Q8WXD0 754 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 SLC39A13Q96H72 371 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 PDLIM2Q96JY6 352 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 EIF3CQ99613 913 aaKnown RBP20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 TRMT61BQ9BVS5 477 aaKnown RBP20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 DCLK3Q9C098 648 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 THAP2Q9H0W7 228 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 CFAP97Q9P2B7 532 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 INTUQ9ULD6 942 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 SORCS3Q9UPU3 1222 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 TLR6Q9Y2C9 796 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 SH3BP1Q9Y3L3 701 aa20.2■□□□□ 0.82
PCOLCE-208ENST00000487172 SOWAHDA6NJG2 315 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 SLC9A3R1O14745 358 aaPredicted RBP20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 IRAK2O43187 625 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 STC2O76061 302 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 ENDOD1O94919 500 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 CYP1A2P05177 515 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 PTPN9P43378 593 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 TBX4P57082 545 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 PITX1P78337 314 aaPredicted RBP20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 YAF2Q8IY57 180 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 EMC1Q8N766 993 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 WBP2Q969T9 261 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 NECAB3Q96P71 396 aaPredicted RBP20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 FAM83CQ9BQN1 747 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 TBC1D14Q9P2M4 693 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 LSM7Q9UK45 103 aaKnown RBP20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 ZNF510Q9Y2H8 683 aa20.19■□□□□ 0.82
PCOLCE-208ENST00000487172 M0QYT0 321 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 NDUFA10O95299 355 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 GJB6O95452 261 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 F9P00740 461 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 PDGFRAP16234 1089 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 RPL7AP62424 266 aaKnown RBP20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 DCUN1D2Q6PH85 259 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 RAD9BQ6WBX8 426 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 LRRC8AQ8IWT6 810 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 UNC45BQ8IWX7 931 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 CCDC112Q8NEF3 446 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 AZIN2Q96A70 460 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 OTUB2Q96DC9 234 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 MCEEQ96PE7 176 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 TRPV5Q9NQA5 729 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 SLC2A4RGQ9NR83 387 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 MYO1AQ9UBC5 1043 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 DUSP12Q9UNI6 340 aa20.18■□□□□ 0.82
PCOLCE-208ENST00000487172 TMEM191CA6NGB0 347 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 ATMINO43313 823 aaPredicted RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 MSI1O43347 362 aaKnown RBP20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 LATS1O95835 1130 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 IRF1P10914 325 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 SRFP11831 508 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 GPD1P21695 349 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 GDI1P31150 447 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 SDC4P31431 198 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 MAGEA1P43355 309 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 SULT1E1P49888 294 aa20.17■□□□□ 0.82
PCOLCE-208ENST00000487172 GRM2Q14416 872 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms