RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SP8Q8IXZ3 490 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 TMEM130Q8N3G9 435 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 MPP5Q8N3R9 675 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 GIPC3Q8TF64 312 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 GLT8D2Q9H1C3 349 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 C1orf21Q9H246 121 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 RNPEPQ9H4A4 650 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 ZNF358Q9NW07 568 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 PRR12Q9ULL5 1215 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 PAIP2BQ9ULR5 123 aaKnown RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 BARX2Q9UMQ3 279 aaPredicted RBP8.21□□□□□ -1.09
TPM3-215ENST00000469717 TEX264Q9Y6I9 313 aa8.21□□□□□ -1.09
TPM3-215ENST00000469717 GOLGA8QA0A0J9YX86 632 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 GOLGA8OA6NCC3 632 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 C3orf70A6NLC5 250 aaPredicted RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 GOLGA8NF8WBI6 632 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 KLF11O14901 512 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 AP1G1O43747 822 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 CSPG5O95196 566 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 GSRP00390 522 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 BPGMP07738 259 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 EPHA3P29320 983 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 SERPINB5P36952 375 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 THOP1P52888 689 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 GTF2BQ00403 316 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 ABCB5Q2M3G0 1257 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 FASTKD1Q53R41 847 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 TDRD10Q5VZ19 366 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 ANO5Q75V66 913 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 MIER3Q7Z3K6 550 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 ABRAQ8N0Z2 381 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 SMYD1Q8NB12 490 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 ACTRT2Q8TDY3 377 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 AGAP3Q96P47 875 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 PKP2Q99959 881 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 ACO1P21399 889 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 MLH1P40692 756 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 GRIA1P42261 906 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 HDAC4P56524 1084 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 MS4A2Q01362 244 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 DPYSL3Q14195 570 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 PUS10Q3MIT2 529 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 ZNF362Q5T0B9 420 aaPredicted RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 TEDDM1Q5T9Z0 273 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 ATG16L1Q676U5 607 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 PDPK2PQ6A1A2 396 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 DRICH1Q6PGQ1 229 aaPredicted RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 TRIM72Q6ZMU5 477 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 PODNQ7Z5L7 613 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 SLC26A11Q86WA9 606 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 FBXW8Q8N3Y1 598 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 JOSD2Q8TAC2 188 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 RAB3IL1Q8TBN0 382 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 MRPL47Q9HD33 250 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 TBC1D22BQ9NU19 505 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 EBF1Q9UH73 591 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 HERC5Q9UII4 1024 aaKnown RBP8.21□□□□□ -1.1
TPM3-215ENST00000469717 TBX20Q9UMR3 447 aa8.21□□□□□ -1.1
TPM3-215ENST00000469717 PLOD2O00469 737 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 CASQ2O14958 399 aaPredicted RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 HNRNPDLO14979 420 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 P4HA1P13674 534 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 RFC1P35251 1148 aaPredicted RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 NPTX2P47972 431 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 IDH3AP50213 366 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 CRADDP78560 199 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 APOFQ13790 326 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 TTC39BQ5VTQ0 682 aaPredicted RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 FASTKD5Q7L8L6 764 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 SLC15A3Q8IY34 581 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 HACE1Q8IYU2 909 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 BTBD9Q96Q07 612 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 MXRA8Q9BRK3 442 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 CALN1Q9BXU9 219 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 PCDH18Q9HCL0 1135 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 RNF11Q9Y3C5 154 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 STRNO43815 780 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 VNN1O95497 513 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 GH2P01242 217 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 SNRPAP09012 282 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 ALOX15P16050 662 aaPredicted RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 CD97P48960 835 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 NDST2P52849 883 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 MAPK10P53779 464 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 EIF3EP60228 445 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 GSTM4Q03013 218 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 ORC1Q13415 861 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 OGFOD2Q6N063 350 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 POTEHQ6S545 545 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 GADL1Q6ZQY3 521 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 TMEM161BQ8NDZ6 487 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 PIWIL2Q8TC59 973 aaKnown RBP8.2□□□□□ -1.1
TPM3-215ENST00000469717 MAPK15Q8TD08 544 aa8.2□□□□□ -1.1
TPM3-215ENST00000469717 MARK4Q96L34 752 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms