RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PDHBP11177 359 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GAP43P17677 238 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 KELP23276 732 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CDC25CP30307 473 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ADCY8P40145 1251 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NPTX2P47972 431 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 HSPA13P48723 471 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 AK2P54819 239 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 VBP1P61758 197 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 UBE2IP63279 158 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 S100A12P80511 92 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 PPFIA1Q13136 1202 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TRIM14Q14142 442 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPARCL1Q14515 664 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NAA25Q14CX7 972 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ALG11Q2TAA5 492 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 MYLK3Q32MK0 819 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 LRIT3Q3SXY7 679 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CFAP100Q494V2 611 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 C2orf27AQ580R0 203 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ODF2Q5BJF6 829 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 THEMIS2Q5TEJ8 643 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM205BPQ63HN1 556 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TBC1D9BQ66K14 1250 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 PDPK2PQ6A1A2 396 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 HEATR6Q6AI08 1181 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SIGIRRQ6IA17 410 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM171BQ6P995 826 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 BORAQ6PGQ7 559 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GLB1LQ6UWU2 654 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 RGS9BPQ6ZS82 235 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 C3orf62Q6ZUJ4 267 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NECAB2Q7Z6G3 386 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ADAT2Q7Z6V5 191 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 RNF180Q86T96 592 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZBTB46Q86UZ6 589 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZFPM1Q8IX07 1006 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 KIAA0319LQ8IZA0 1049 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TTLL6Q8N841 843 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NIPA2Q8N8Q9 360 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SCAIQ8N9R8 606 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 DNAAF3Q8N9W5 541 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 OR56B2PQ8NGI1 322 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CAGE1Q8TC20 777 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC26A7Q8TE54 656 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM216AQ8WUB2 273 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 HNRNPLLQ8WVV9 542 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 DYDC1Q8WWB3 177 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 IFT81Q8WYA0 676 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 KLHL6Q8WZ60 621 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZKSCAN4Q969J2 545 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TTC17Q96AE7 1141 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 OPTNQ96CV9 577 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TMA16Q96EY4 203 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 RCC1LQ96I51 464 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF845Q96IR2 970 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CABS1Q96KC9 395 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CIB1Q99828 191 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 MYD88Q99836 296 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 BCL7BQ9BQE9 202 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 JPH2Q9BR39 696 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 HAUS8Q9BT25 410 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TBCDQ9BTW9 1192 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 DDX23Q9BUQ8 820 aaKnown RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 C9orf16Q9BUW7 83 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 MXD3Q9BW11 206 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TXLNGYQ9BZA5 131 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GCOM2Q9BZD3 368 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 UBXN6Q9BZV1 441 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 DRC3Q9H069 523 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPON1Q9HCB6 807 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 ST7Q9NRC1 585 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 NMRK1Q9NWW6 199 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 GALNT8Q9NY28 637 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 TELO2Q9Y4R8 837 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 AP1M2Q9Y6Q5 423 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 CPS1P31327 1500 aa4.97□□□□□ -1.61
HMGB3P9-201ENST00000441799 SHANK2Q9UPX8 1470 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 SBNO1A3KN83 1393 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 KTN1Q86UP2 1357 aaKnown RBP4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 ABCC11Q96J66 1382 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 USP47Q96K76 1375 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 ANKRD30BQ9BXX2 1392 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 KIF15Q9NS87 1388 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 CYP3A7-CYP3A51PA0A087WV96 503 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 C1orf232A0A0U1RR37 186 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCDC78A2IDD5 438 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 HEATR9A2RTY3 570 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 OR6C74A6NCV1 312 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 LRRIQ3A6PVS8 624 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 GOLGA8BA8MQT2 603 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 NDUFS8O00217 210 aa4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 SMAD6O43541 496 aaKnown RBP4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 CCNT1O60563 726 aaKnown RBP4.96□□□□□ -1.62
HMGB3P9-201ENST00000441799 PPM1BO75688 479 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms