RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PRRX2Q99811 253 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 AGPAT1Q99943 283 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 XPO4Q9C0E2 1151 aaKnown RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 SFMBT1Q9UHJ3 866 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-206ENST00000439717 ITIH6Q6UXX5 1313 aa12.34□□□□□ -0.43
HSPG2-206ENST00000439717 SCAMP3O14828 347 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 PI15O43692 258 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 LATS1O95835 1130 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 IGLV3-27P01718 113 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 KLKB1P03952 638 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 HMBSP08397 361 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 UNGP13051 313 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CORO1AP31146 461 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CHKAP35790 457 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 PRKCIP41743 596 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 GAD2Q05329 585 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 RING1Q06587 406 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 LRRC32Q14392 662 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CLEC16AQ2KHT3 1053 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 TMEM196Q5HYL7 178 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 RHBDF2Q6PJF5 856 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 TXNDC11Q6PKC3 985 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 UNC45BQ8IWX7 931 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 DQX1Q8TE96 717 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CPA5Q8WXQ8 436 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CHFRQ96EP1 664 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SLC2A13Q96QE2 648 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 IER2Q9BTL4 223 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 TMEM51Q9NW97 253 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 AGO1Q9UL18 857 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 NDRG2Q9UN36 371 aaKnown RBP12.33□□□□□ -0.44
HSPG2-206ENST00000439717 NAALADL1Q9UQQ1 740 aa12.33□□□□□ -0.44
HSPG2-206ENST00000439717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■□□□□ 10.3
HSPG2-206ENST00000439717 HOXC11O43248 304 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DAB1O75553 588 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 CHRNB1P11230 501 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 ADH5P11766 374 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DRD1P21728 446 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 MMP8P22894 467 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 GBP1P32455 592 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 NSFP46459 744 aaKnown RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 TBX4P57082 545 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 ZBED6P86452 979 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 CENPCQ03188 943 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 FZD5Q13467 585 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PON2Q15165 354 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 TAF5Q15542 800 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 GAB4Q2WGN9 574 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 SYPL2Q5VXT5 272 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 XYLT1Q86Y38 959 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PHF13Q86YI8 300 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DENND1CQ8IV53 801 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 DEFB106AQ8N104 65 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 CD101Q93033 1021 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 AZIN2Q96A70 460 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PIWIL1Q96J94 861 aaKnown RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 ANP32EQ9BTT0 268 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 LMAN1LQ9HAT1 526 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 MARK1Q9P0L2 795 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 WDR35Q9P2L0 1181 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 STOML2Q9UJZ1 356 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 TLR6Q9Y2C9 796 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 HCN4Q9Y3Q4 1203 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 BZW2Q9Y6E2 419 aaKnown RBP12.32□□□□□ -0.44
HSPG2-206ENST00000439717 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
HSPG2-206ENST00000439717 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 TNFAIP3P21580 790 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 NOS2P35228 1153 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 MATKP42679 507 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 GALK1P51570 392 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 GSCP56915 257 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 CDK17Q00537 523 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 KLHL30Q0D2K2 578 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms