RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CYB561D2O14569 222 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 SNUPNO95149 360 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 ASMTLO95671 621 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TAC1P20366 129 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TGM2P21980 687 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 AMPD1P23109 780 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 GEMIN4P57678 1058 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 YWHAZP63104 245 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 GPRIN1Q7Z2K8 1008 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 PRPF39Q86UA1 669 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 ZDHHC17Q8IUH5 632 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 DCAKDQ8WVC6 231 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 DHRS4Q9BTZ2 278 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 CRTAC1Q9NQ79 661 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 ST3GAL5Q9UNP4 418 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TSC2P49815 1807 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 MYO18AQ92614 2054 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TCRBV9S1A1TA0A576 114 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 HGSO14964 777 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 METTL18O95568 372 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 STIP1P31948 543 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 PNPLA4P41247 253 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 MRPS6P82932 125 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 GNASQ5JWF2 1037 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 SYPL2Q5VXT5 272 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 NCBP2-AS2Q69YL0 99 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 CLEC20AQ6ZU45 233 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 PALM2Q8IXS6 379 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 RTP4Q96DX8 246 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 SPDL1Q96EA4 605 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 RHOBTB2Q9BYZ6 727 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 USP3Q9Y6I4 520 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TEX264Q9Y6I9 313 aa15.75■□□□□ 0.11
SCAMP4-202ENST00000409472 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 MANSC4A6NHS7 340 aaPredicted RBP15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CCT8L1PA6NM43 557 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 I3L4J1 428 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 TYROBPO43914 113 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM155BO75949 473 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CHRNA1P02708 482 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 APRTP07741 180 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 KRT4P19013 534 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 WARSP23381 471 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 GRIA1P42261 906 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 SCTRP47872 440 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 SULT1E1P49888 294 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CLCNKBP51801 687 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CAP1Q01518 475 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 ARHGEF18Q6ZSZ5 1173 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 SAPCD2Q86UD0 394 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CAND1Q86VP6 1230 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 TP53INP2Q8IXH6 220 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 ADAM32Q8TC27 787 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 TRIB2Q92519 343 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 CFAP36Q96G28 342 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 KATNAL1Q9BW62 490 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 ETNK1Q9HBU6 452 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 SLCO1B3Q9NPD5 702 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 GABRQQ9UN88 632 aa15.74■□□□□ 0.11
SCAMP4-202ENST00000409472 NRP1O14786 923 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 XPO1O14980 1071 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 AKR1A1P14550 325 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 VAV1P15498 845 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PTPN1P18031 435 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 CA4P22748 312 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 LRPAP1P30533 357 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 DNAJC3Q13217 504 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 IRF5Q13568 498 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 ITIH4Q14624 930 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 KBTBD12Q3ZCT8 623 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 DCAF6Q58WW2 860 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 ZNF534Q76KX8 674 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 RMDN2Q96LZ7 410 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MAGEB18Q96M61 343 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PLCD4Q9BRC7 762 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 CEP41Q9BYV8 373 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 TSPYL2Q9H2G4 693 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 AGO3Q9H9G7 860 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 KRT82Q9NSB4 513 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 DTLQ9NZJ0 730 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 GTF2IRD1Q9UHL9 959 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 I6L893 689 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MFSD11O43934 449 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 C1QAP02745 245 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 NPR3P17342 541 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 SCNN1GP51170 649 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 YWHAGP61981 247 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MGAT5Q09328 741 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 E2F5Q15329 346 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PDCD2Q16342 344 aaPredicted RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 KCNT2Q6UVM3 1135 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MPP5Q8N3R9 675 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 TOP6BLQ8N6T0 577 aa15.73■□□□□ 0.11
SCAMP4-202ENST00000409472 MICAL1Q8TDZ2 1067 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms