RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 SFTPA1Q8IWL2 248 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 PGBD3Q8N328 593 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 PHTF2Q8N3S3 785 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 TFAP2BQ92481 460 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 NDRG1Q92597 394 aaKnown RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 KAT5Q92993 513 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 BHMTQ93088 406 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 PLD4Q96BZ4 506 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 ZC3H10Q96K80 434 aaKnown RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 CNOT6LQ96LI5 555 aaKnown RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 PARD6AQ9NPB6 346 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 ABCC13Q9NSE7 274 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 MYH10P35580 1976 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 EP300Q09472 2414 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-205ENST00000395794 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
CXCL12-205ENST00000395794 RNF225M0QZC1 329 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 SGK1O00141 431 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 KLKB1P03952 638 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 TGM1P22735 817 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 RGS7P49802 495 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 BYSLQ13895 437 aaKnown RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 E2F5Q15329 346 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 GBP6Q6ZN66 633 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 RASSF3Q86WH2 238 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 FAM114A1Q8IWE2 563 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 SCML4Q8N228 414 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 C12orf50Q8NA57 414 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 SLC35F5Q8WV83 523 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 IRGQQ8WZA9 623 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 EDEM1Q92611 657 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 TPSD1Q9BZJ3 242 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 ARRDC1-AS1Q9H2J1 176 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 HBS1LQ9Y450 684 aaKnown RBP14.38□□□□□ -0.11
CXCL12-205ENST00000395794 PCDHGA5Q9Y5G8 931 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 MYO16Q9Y6X6 1858 aa14.38□□□□□ -0.11
CXCL12-205ENST00000395794 YJEFN3A6XGL0 299 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 E7ENQ6 273 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 MAP3K13O43283 966 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 FBXO21O94952 628 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 EPN2O95208 641 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 NTSR1P30989 418 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 USP8P40818 1118 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 DAOAP59103 153 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 PLK5Q496M5 336 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 PMF1Q6P1K2 205 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 TMEM92Q6UXU6 159 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 PRR23CQ6ZRP0 262 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 CHPFQ8IZ52 775 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 DDI1Q8WTU0 396 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 HMGB4Q8WW32 186 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 KREMEN1Q96MU8 473 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 CRACR2AQ9BSW2 395 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 NUP62CLQ9H1M0 184 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 DLL3Q9NYJ7 618 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 PLK2Q9NYY3 685 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 INVSQ9Y283 1065 aa14.37□□□□□ -0.11
CXCL12-205ENST00000395794 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
CXCL12-205ENST00000395794 OTOGLQ3ZCN5 2332 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 TCRBV21S2A2A0A5A6 115 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 ANTXRLA6NF34 631 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 PIK3R2O00459 728 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 DCLK1O15075 740 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 TRIM24O15164 1050 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 HOXB2P14652 356 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 ZNF132P52740 706 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 ZNF445P59923 1031 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 EXOC3L4Q17RC7 722 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 AASDHQ4L235 1098 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 TRIM65Q6PJ69 517 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 CPXM2Q8N436 756 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 NETO1Q8TDF5 533 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 UCMAQ8WVF2 138 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 TRIM62Q9BVG3 475 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 MIS12Q9H081 205 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 DUSP15Q9H1R2 295 aaPredicted RBP14.36□□□□□ -0.11
CXCL12-205ENST00000395794 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 SFMBT1Q9UHJ3 866 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 CNTN6Q9UQ52 1028 aa14.36□□□□□ -0.11
CXCL12-205ENST00000395794 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
CXCL12-205ENST00000395794 THAP12O43422 761 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 ADAM23O75077 832 aa14.35□□□□□ -0.11
CXCL12-205ENST00000395794 PENKP01210 267 aaPredicted RBP14.35□□□□□ -0.11
CXCL12-205ENST00000395794 CALCAP01258 141 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms