RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 C3orf70A6NLC5 250 aaPredicted RBP17.31■□□□□ 0.36
SIPA1-201ENST00000394224 ETV4P43268 484 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 MED21Q13503 144 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 SLFN12LQ6IEE8 588 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 TDRPQ86YL5 185 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 EPAS1Q99814 870 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 NTPCRQ9BSD7 190 aaKnown RBP17.31■□□□□ 0.36
SIPA1-201ENST00000394224 ELOVL4Q9GZR5 314 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 KLC2Q9H0B6 622 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 SCN9AQ15858 1988 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 APOC4-APOC2K7ER74 178 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 KRT38O76015 456 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 APOC2P02655 101 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 VTNP04004 478 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 MGAT1P26572 445 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 SCNN1BP51168 640 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 NRF1Q16656 503 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 TMEM198Q66K66 360 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 TRNP1Q6NT89 227 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 FAM183BPQ6ZVS7 135 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 GRIP2Q9C0E4 1043 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 PORCNQ9H237 461 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 SNX9Q9Y5X1 595 aa17.31■□□□□ 0.36
SIPA1-201ENST00000394224 CSPG5O95196 566 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 NPTXRO95502 500 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 NUDT2P50583 147 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 YWHAEP62258 255 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 NME3Q13232 169 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 CNPY1Q3B7I2 92 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 LGSNQ5TDP6 509 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 ABHD15Q6UXT9 468 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 CTU1Q7Z7A3 348 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 ZC3H11AO75152 810 aaKnown RBP eCLIP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 TRUB2O95900 331 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 SLC1A6P48664 564 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 NDST1P52848 882 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 LAMTOR4Q0VGL1 99 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 DEFB129Q9H1M3 183 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 ST6GALNAC4Q9H4F1 302 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 HBS1LQ9Y450 684 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 ADCY6O43306 1168 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 FESP07332 822 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 COG7P83436 770 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 SPDYAQ5MJ70 313 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 RNF135Q8IUD6 432 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 PLD5Q8N7P1 536 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 LIN28AQ9H9Z2 209 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 TSPAN16Q9UKR8 245 aa17.3■□□□□ 0.36
SIPA1-201ENST00000394224 ZNFX1Q9P2E3 1918 aaKnown RBP17.3■□□□□ 0.36
SIPA1-201ENST00000394224 AHCYL1O43865 530 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 EPHA3P29320 983 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 ROR2Q01974 943 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 PTPN11Q06124 597 aaPredicted RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 JADE1Q6IE81 842 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 KCNT2Q6UVM3 1135 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 CAND1Q86VP6 1230 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 RPF1Q9H9Y2 349 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 AKT3Q9Y243 479 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 TEX264Q9Y6I9 313 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 CITO14578 2027 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 SIGLEC16A6NMB1 481 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 APOL1O14791 398 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 XPO1O14980 1071 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 HNRNPRO43390 633 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 RFPL1O75677 317 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 HSPA4LO95757 839 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 ASPAP45381 313 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 PDK1Q15118 436 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 MPP4Q96JB8 637 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 COPS7BQ9H9Q2 264 aaPredicted RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 STBD1O95210 358 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 COPAP53621 1224 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 IFRD2Q12894 506 aaPredicted RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 TMED1Q13445 227 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 EFHC1Q5JVL4 640 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 ATG14Q6ZNE5 492 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 FRMD7Q6ZUT3 714 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 RPS27LQ71UM5 84 aaKnown RBP17.29■□□□□ 0.36
SIPA1-201ENST00000394224 ADGRF2Q8IZF7 708 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 CCNYL1Q8N7R7 359 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 TTC13Q8NBP0 860 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 OR6B3Q8NGW1 331 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 VCPIP1Q96JH7 1222 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 ASNSD1Q9NWL6 643 aa17.29■□□□□ 0.36
SIPA1-201ENST00000394224 LACTBL1A8MY62 500 aa17.28■□□□□ 0.36
SIPA1-201ENST00000394224 PAPSS1O43252 624 aaPredicted RBP17.28■□□□□ 0.36
SIPA1-201ENST00000394224 LYPLA2O95372 231 aa17.28■□□□□ 0.36
SIPA1-201ENST00000394224 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms