RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 EPHA10Q5JZY3 1008 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 DNAJC1Q96KC8 554 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 CAB39LQ9H9S4 337 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 GAS2O43903 313 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 HK2P52789 917 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 LRRC6Q86X45 466 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ADHFE1Q8IWW8 467 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 POLR1BQ9H9Y6 1135 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ANKRD65E5RJM6 399 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 EGFRP00533 1210 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 PTPN7P35236 360 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 RALGDSQ12967 914 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 OLFML2AQ68BL7 652 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ATP6V0D2Q8N8Y2 350 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 TSPAN14Q8NG11 270 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 CPA5Q8WXQ8 436 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 APOL5Q9BWW9 433 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SSU72P8A0A1W2PR75 194 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 FAM20BO75063 409 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 KCNB1Q14721 858 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF284Q2VY69 593 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 INTS11Q5TA45 600 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ZBTB49Q6ZSB9 765 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF605Q86T29 641 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 FNIP1Q8TF40 1166 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SMURF2Q9HAU4 748 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM138Q9NPI0 162 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 RAD51BO15315 384 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 PHGDHO43175 533 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ATP6V1B2P21281 511 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 PTGER2P43116 358 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 RGS21Q2M5E4 152 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SCAIQ8N9R8 606 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SLC38A2Q96QD8 506 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM79Q9BSE2 394 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 A0A1W2PQ72 361 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 COPZ1P61923 177 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 PWP1Q13610 501 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 GLYCTKQ8IVS8 523 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 CMTM6Q9NX76 183 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 MYRFQ9Y2G1 1151 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 HAT1O14929 419 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 GATBO75879 557 aaKnown RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 IL12AP29459 219 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 SLC11A2P49281 568 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 HMGCS2P54868 508 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF512Q96ME7 567 aaPredicted RBP15.12■□□□□ 0.01
CCDC50-201ENST00000392455 PHF20Q9BVI0 1012 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 RASSF1Q9NS23 344 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 CKLFQ9UBR5 152 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 CIDEBQ9UHD4 219 aa15.12■□□□□ 0.01
CCDC50-201ENST00000392455 ZMYM2Q9UBW7 1377 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 KHDRBS3O75525 346 aaKnown RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 CAPGP40121 348 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 RAP1GAPP47736 663 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 ACTRT2Q8TDY3 377 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 PTPN3P26045 913 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TUBA3CQ13748 450 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 ARHGAP22Q7Z5H3 698 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 STOX2Q9P2F5 926 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 LRCH1Q9Y2L9 728 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 MAGEB3O15480 346 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 UPP2O95045 317 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TGM2P21980 687 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 GRIK3Q13003 919 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 KBTBD8Q8NFY9 601 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TBCDQ9BTW9 1192 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 ARHGEF19Q8IW93 802 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 FMR1NBQ8N0W7 255 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 SLC9A6Q92581 669 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 AIFM2Q9BRQ8 373 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 RECQL5O94762 991 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TPBGLP0DKB5 382 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 DCKP27707 260 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 RGS7P49802 495 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 HUNKP57058 714 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 LDHDQ86WU2 507 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 ZNF557Q8N988 423 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 PABPC5Q96DU9 382 aaKnown RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 COX4I2Q96KJ9 171 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 VPS35Q96QK1 796 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TRIM2Q9C040 744 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 SYNPO2Q9UMS6 1093 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 EIF4E1BA6NMX2 242 aaKnown RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 H7C4K7 107 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 TMEM62Q0P6H9 643 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 MTSS1LQ765P7 747 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
CCDC50-201ENST00000392455 UBE2E3Q969T4 207 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 MTMR12Q9C0I1 747 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 PSME2Q9UL46 239 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 RFX7Q2KHR2 1363 aa15.11■□□□□ 0.01
CCDC50-201ENST00000392455 PCSK7Q16549 785 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 NEDD4LQ96PU5 975 aa15.1■□□□□ 0.01
CCDC50-201ENST00000392455 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms