RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 LYPLA2O95372 231 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 IL1BP01584 269 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 DLG4P78352 724 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 SGO1Q5FBB7 561 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 LZTR1Q8N653 840 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 LRRC52Q8N7C0 313 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 FLCNQ8NFG4 579 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 LENG9Q96B70 501 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 TSPAN18Q96SJ8 248 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 CCDC3Q9BQI4 270 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 TRIM55Q9BYV6 548 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 WWOXQ9NZC7 414 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 RPS6KL1Q9Y6S9 549 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 BRAFP15056 766 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 OTUD4Q01804 1114 aaKnown RBP10.02□□□□□ -0.81
GABPA-201ENST00000354828 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 GRB14Q14449 540 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 RAD9BQ6WBX8 426 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 FAM47EQ6ZV65 393 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 CPA6Q8N4T0 437 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 TOP6BLQ8N6T0 577 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 TPCN2Q8NHX9 752 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 RSPH1Q8WYR4 309 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 ZSWIM1Q9BR11 485 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 PITPNM3Q9BZ71 974 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 TUBGCP4Q9UGJ1 667 aa10.02□□□□□ -0.81
GABPA-201ENST00000354828 MRPS17Q9Y2R5 130 aaKnown RBP10.02□□□□□ -0.81
GABPA-201ENST00000354828 A0A087X0B3 334 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CLDN5O00501 218 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 NR1D1P20393 614 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 PPP3CAQ08209 521 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 TAF11Q15544 211 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 MCOLN2Q8IZK6 566 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 ZNF513Q8N8E2 541 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 OR5B17Q8NGF7 314 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 FAM136AQ96C01 138 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SPDL1Q96EA4 605 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 RSRC1Q96IZ7 334 aaKnown RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 GIMAP4Q9NUV9 329 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 ABHD14A-ACY1A0A1B0GW23 586 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 FRMD3A2A2Y4 597 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 FOXP2O15409 715 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 VPS26AO75436 327 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SERPINA4P29622 427 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 NOS2P35228 1153 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CBWD6Q4V339 395 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CBWD3Q5JTY5 395 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CBWD5Q5RIA9 395 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 ZBTB41Q5SVQ8 909 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CNKSR3Q6P9H4 555 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 FAM124AQ86V42 546 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SLC13A5Q86YT5 568 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 CXorf40AQ8TE69 158 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 TBCBQ99426 244 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 CFAP97Q9P2B7 532 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SPAG7O75391 227 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 EOMESO95936 686 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 AMPD1P23109 780 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 RAP1GDS1P52306 607 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 PRKAA1Q13131 559 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CASP8Q14790 479 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 CNGA2Q16280 664 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 PPIL6Q8IXY8 311 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 WNT8BQ93098 351 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 TMEM51Q9NW97 253 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 GTF2IRD1Q9UHL9 959 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 MAFBQ9Y5Q3 323 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 SPACA6W5XKT8 324 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 A0A1W2PQ45 241 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 A0A1W2PQY0 241 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SMAPO00193 183 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABPA-201ENST00000354828 APODP05090 189 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 GRK3P35626 688 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SERPINB9P50453 376 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 STAT4Q14765 748 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 TSNAXIP1Q2TAA8 658 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 SETMARQ53H47 684 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 TDRD5Q8NAT2 981 aaKnown RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 HJURPQ8NCD3 748 aaPredicted RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 HSFY1Q96LI6 401 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 EFHD1Q9BUP0 239 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 EIF2AQ9BY44 585 aaKnown RBP10.01□□□□□ -0.81
GABPA-201ENST00000354828 FAM96AQ9H5X1 160 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D13Q9NVG8 400 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 BAIAP2L1Q9UHR4 511 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
GABPA-201ENST00000354828 IGKV6D-41A0A0C4DH26 115 aa10□□□□□ -0.81
GABPA-201ENST00000354828 FAM95CA0A1B0GW59 222 aa10□□□□□ -0.81
GABPA-201ENST00000354828 HMGB1P1B2RPK0 211 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms