RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MAPRE2Q15555 327 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PARP6Q2NL67 630 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 ANO4Q32M45 955 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 EFCAB1Q9HAE3 211 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 A0A0B4J269 797 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 GSC2O15499 205 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 BLMHQ13867 455 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 C6orf10Q5SRN2 563 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 SLC9A9Q8IVB4 645 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 ZSCAN18Q8TBC5 510 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 MAN1C1Q9NR34 630 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 CHST12Q9NRB3 414 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 M0R2N6 131 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 BNIP3LO60238 219 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 CCNE2O96020 404 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 MSX2P35548 267 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 HDAC4P56524 1084 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 UBAP2LQ14157 1087 aaKnown RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 SLC44A4Q53GD3 710 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 IER5Q5VY09 327 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 CDRT15Q96T59 188 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 GRIP2Q9C0E4 1043 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 ARHGEF37A1IGU5 675 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 PLIN5Q00G26 463 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 ZBTB17Q13105 803 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 LAMC2Q13753 1193 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 TMEM161BQ8NDZ6 487 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 GSTCDQ8NEC7 633 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 TCF7L2Q9NQB0 619 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 TBC1D23Q9NUY8 699 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 VAV3Q9UKW4 847 aa16.9■□□□□ 0.3
SFXN1-201ENST00000321442 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-201ENST00000321442 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 H0YGN5 161 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 KCNK1O00180 336 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 EEF2KO00418 725 aaKnown RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 ALADP13716 330 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 AKAP5P24588 427 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 GSCP56915 257 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 LAMTOR4Q0VGL1 99 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 PDK1Q15118 436 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 SPRED3Q2MJR0 410 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 ALLCQ8N6M5 410 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 LENG1Q96BZ8 264 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 ZNF518BQ9C0D4 1074 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 ETAA1Q9NY74 926 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 NDUFA13Q9P0J0 144 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 NFS1Q9Y697 457 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 CXCL11O14625 94 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 AHCYL1O43865 530 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 CYP3A4P08684 503 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 MLH1P40692 756 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 C15orf59Q2T9L4 293 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 SEL1L3Q68CR1 1132 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 CATSPER2Q96P56 530 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 PRDM5Q9NQX1 630 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 BTBD7Q9P203 1132 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 NUP98P52948 1817 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 NAMPTP43490 491 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 WDR4P57081 412 aaKnown RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 GTF2BQ00403 316 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 CLEC4FQ8N1N0 589 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 SLC7A14Q8TBB6 771 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 USP6NLQ92738 828 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 MROH8Q9H579 483 aa16.89■□□□□ 0.29
SFXN1-201ENST00000321442 COPS7BQ9H9Q2 264 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-201ENST00000321442 WDR27A2RRH5 827 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 ALOX15BO15296 676 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PMPCBO75439 489 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 ANPEPP15144 967 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 KDELR1P24390 212 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PTK2BQ14289 1009 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 SNX32Q86XE0 403 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 OR5B17Q8NGF7 314 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 DNAJB3Q8WWF6 145 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PKD2L2Q9NZM6 624 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PRR5-ARHGAP8B1AHC4 643 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 PGK1P00558 417 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 MAPTP10636 758 aaKnown RBP16.88■□□□□ 0.29
SFXN1-201ENST00000321442 ARHGAP8P85298 464 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 UNC45BQ8IWX7 931 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 BBS5Q8N3I7 341 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 ACSS3Q9H6R3 686 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 SLC12A4Q9UP95 1085 aa16.88■□□□□ 0.29
SFXN1-201ENST00000321442 TIMM13Q9Y5L4 95 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-201ENST00000321442 LSM8O95777 96 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms