RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CCDC130P13994 396 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 NCF1P14598 390 aaPredicted RBP17.73■□□□□ 0.43
GABRB3-202ENST00000311550 GRIK4Q16099 956 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 ZACNQ401N2 412 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 FUT11Q495W5 492 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 TMPRSS6Q8IU80 811 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 SLC16A10Q8TF71 515 aa17.73■□□□□ 0.43
GABRB3-202ENST00000311550 RNF103O00237 685 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 PTPRAP18433 802 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 ZNF157P51786 506 aaPredicted RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 WASHC2DQ5SRD0 308 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 DEFB106AQ8N104 65 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 THPOP40225 353 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 ABCG1P45844 678 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 NCKAP1LP55160 1127 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 MMRN1Q13201 1228 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 PTRHD1Q6GMV3 140 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 GID8Q9NWU2 228 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CASTOR2A6NHX0 329 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 NFICP08651 508 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 TGFB2P61812 414 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CRADDP78560 199 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 SLC6A3Q01959 620 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 GANCQ8TET4 914 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 COPS5Q92905 334 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 SNX13Q9Y5W8 968 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 SIGLEC16A6NMB1 481 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 MAP4P27816 1152 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CSE1LP55060 971 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CDK16Q00536 496 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CRY2Q49AN0 593 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 THEMIS2Q5TEJ8 643 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 USP6NLQ92738 828 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 BCL9LQ86UU0 1499 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 PDE5AO76074 875 aa17.72■□□□□ 0.43
GABRB3-202ENST00000311550 TRMT5Q32P41 509 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 DDX43Q9NXZ2 648 aaKnown RBP17.72■□□□□ 0.43
GABRB3-202ENST00000311550 CAPSQ13938 189 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 FKBP1CQ5VVH2 108 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 PPP1R13LQ8WUF5 828 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 SPATA17Q96L03 361 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 CATSPER2Q96P56 530 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 MYO1DO94832 1006 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 SERPINE1P05121 402 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 GP5P40197 560 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 MLH1P40692 756 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 RNF148Q8N7C7 305 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 THAP1Q9NVV9 213 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 FMN2Q9NZ56 1722 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 YWHAZP63104 245 aaKnown RBP17.71■□□□□ 0.43
GABRB3-202ENST00000311550 RAD51Q06609 339 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 LRRC57Q8N9N7 239 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 STKLD1Q8NE28 680 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 ZBTB10Q96DT7 871 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 TCF7L2Q9NQB0 619 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 HSPA1AP0DMV8 641 aaKnown RBP17.71■□□□□ 0.43
GABRB3-202ENST00000311550 HSPA1BP0DMV9 641 aaKnown RBP17.71■□□□□ 0.43
GABRB3-202ENST00000311550 ALADP13716 330 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 NNMTP40261 264 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 STK32AQ8WU08 396 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 SH3GL2Q99962 352 aa17.71■□□□□ 0.43
GABRB3-202ENST00000311550 R3HDM2Q9Y2K5 976 aaKnown RBP17.71■□□□□ 0.43
GABRB3-202ENST00000311550 FAM237BA0A1B0GVD1 139 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 TMEM247A6NEH6 219 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 HNRNPCP07910 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 SLC34A1Q06495 639 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 LAMB3Q13751 1172 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 ELMOD1Q8N336 334 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 GPR63Q9BZJ6 419 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 ETNK2Q9NVF9 386 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 A0A0B4J269 797 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 STARD13Q9Y3M8 1113 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 SRRM3A6NNA2 597 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 GJB1P08034 283 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 MMP13P45452 471 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 POU4F1Q01851 419 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 IYDQ6PHW0 289 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 VPS50Q96JG6 964 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 TMEM134Q9H6X4 195 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 GPAMQ9HCL2 828 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 A0A096LPK6 155 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 FOXO6A8MYZ6 492 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 THP07101 528 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 HIST1H2AGP0C0S8 130 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 HIST1H2ADP20671 130 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 AKT1P31749 480 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 HIST1H2AHQ96KK5 128 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 HIST1H2AJQ99878 128 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 H2AFJQ9BTM1 129 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
GABRB3-202ENST00000311550 ATXN3LQ9H3M9 355 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 NT5MQ9NPB1 228 aa17.7■□□□□ 0.42
GABRB3-202ENST00000311550 MYO1GB0I1T2 1018 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms