RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SLC6A17Q9H1V8 727 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 GRPEL1Q9HAV7 217 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 CAPN10Q9HC96 672 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 FANCLQ9NW38 375 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 CALCOCO1Q9P1Z2 691 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 MSRB2Q9Y3D2 182 aa10.61□□□□□ -0.71
PHGDH-222ENST00000641587 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TBC1D3BA6NDS4 549 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SLC9A3R1O14745 358 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TULP3O75386 442 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 NR3C1P04150 777 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 DLATP10515 647 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 HOXB2P14652 356 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 PTPN1P18031 435 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 GNL1P36915 607 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TNFRSF4P43489 277 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 PGFP49763 221 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 ATXN3P54252 364 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 ZNF33AQ06730 810 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 NCAPHQ15003 741 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 MAPRE1Q15691 268 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 EDRF1Q3B7T1 1238 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 HSF5Q4G112 596 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 ZCWPW2Q504Y3 356 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 C10orf76Q5T2E6 689 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TDRD10Q5VZ19 366 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 EGFLAMQ63HQ2 1017 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TRAPPC11Q7Z392 1133 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TMEM25Q86YD3 366 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 HDDC3Q8N4P3 179 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TERB1Q8NA31 727 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 ANKRD20A12PQ8NF67 263 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 OR6B3Q8NGW1 331 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SCAMP5Q8TAC9 235 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 FBXO32Q969P5 355 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SLITRK1Q96PX8 696 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 MED15Q96RN5 788 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 KCNK16Q96T55 309 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 ACOX2Q99424 681 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 DUSP9Q99956 384 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 B3GNT5Q9BYG0 378 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SNX25Q9H3E2 840 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CCSER2Q9H7U1 834 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 AGPAT3Q9NRZ7 376 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SAMSN1Q9NSI8 373 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 HSPBP1Q9NZL4 362 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CGNQ9P2M7 1197 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 SLC6A14Q9UN76 642 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 CYP8B1Q9UNU6 501 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 TRAF3IP3Q9Y228 551 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
PHGDH-222ENST00000641587 PLXNB3Q9ULL4 1909 aa10.6□□□□□ -0.71
PHGDH-222ENST00000641587 A0A0A0MRY4 1105 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 IGHV1OR15-9A0A0B4J2B8 117 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 A0A1W2PQF6 199 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 E2F8A0AVK6 867 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 ZNF233A6NK53 670 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CETN3O15182 167 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 HOXC11O43248 304 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-222ENST00000641587 TGFB1I1O43294 461 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 AP5Z1O43299 807 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 OPHN1O60890 802 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CAPNS1P04632 268 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CD59P13987 128 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 NDUFV2P19404 249 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 PPP3CCP48454 512 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
PHGDH-222ENST00000641587 GAD2Q05329 585 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 GFPT1Q06210 699 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-222ENST00000641587 ADAM9Q13443 819 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 DUOXA1Q1HG43 343 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 ANO4Q32M45 955 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 C19orf48Q6RUI8 117 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 WDR49Q8IV35 697 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 B3GALNT2Q8NCR0 500 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CEP295NLQ96MC4 621 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 HSPA12BQ96MM6 686 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CEP63Q96MT8 703 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 ELOVL4Q9GZR5 314 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 THAP9Q9H5L6 903 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 CD248Q9HCU0 757 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 GMIPQ9P107 970 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 SH3BP1Q9Y3L3 701 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 RAD54BQ9Y620 910 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 MYH10P35580 1976 aa10.59□□□□□ -0.71
PHGDH-222ENST00000641587 A8MXQ7 604 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 UPK3BL1B0FP48 263 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 KCNJ18B7U540 433 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 UPK3BL2E5RIL1 263 aa10.58□□□□□ -0.72
PHGDH-222ENST00000641587 PES1O00541 588 aaKnown RBP10.58□□□□□ -0.72
PHGDH-222ENST00000641587 SH3BP5O60239 455 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms