RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ASS1P00966 412 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 GEMP55040 296 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 IL5RAQ01344 420 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ANKS6Q68DC2 871 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FAM45BPQ6NSW5 357 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CNOT3O75175 753 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CAPN1P07384 714 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ABCB1P08183 1280 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SLC11A2P49281 568 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 WDR36Q8NI36 951 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 PPP1R14AQ96A00 147 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CNGB3Q9NQW8 809 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 DDX20Q9UHI6 824 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 USP42Q9H9J4 1324 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 PDK2Q15119 407 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ENKURQ8TC29 256 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 TMEM39BQ9GZU3 492 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 TMBIM4Q9HC24 238 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 NR3C2P08235 984 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 HPGDP15428 266 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CHRNA5P30532 468 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 PDZK1Q5T2W1 519 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CDH24Q86UP0 819 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ATP6V0D2Q8N8Y2 350 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FAM45AQ8TCE6 357 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FBXO32Q969P5 355 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FRMD8P1Q9BZ68 369 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 KLHL20Q9Y2M5 609 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SHROOM3Q8TF72 1996 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FOXN3O00409 490 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 TM9SF1O15321 606 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SLC37A4O43826 429 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CCT8P50990 548 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CACNA2D1P54289 1103 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 NR6A1Q15406 480 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ACOT1Q86TX2 421 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 MYO1HQ8N1T3 1032 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SEPHS2Q99611 448 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 FICDQ9BVA6 458 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CDC42EP4Q9H3Q1 356 aaKnown RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ELOVL6Q9H5J4 265 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SNPHO15079 494 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 PNPLA4P41247 253 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 ARHGAP15Q53QZ3 475 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 RMND5BQ96G75 393 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-218ENST00000635120 SERAC1Q96JX3 654 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 CATSPER2Q96P56 530 aa9.37□□□□□ -0.91
CSMD1-218ENST00000635120 IFNA14P01570 189 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 KRT20P35900 424 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 YWHAZP63104 245 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ERVK-24P63145 666 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TKFCQ3LXA3 575 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ZNF618Q5T7W0 954 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SLFN11Q7Z7L1 901 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 REXO4Q9GZR2 422 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SPTLC1O15269 473 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 MAP3K13O43283 966 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CPSF4O95639 269 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 IL6P05231 212 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FAM98BQ52LJ0 330 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FAM172AQ8WUF8 416 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 MIEF2Q96C03 454 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FANCEQ9HB96 536 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 STIP1P31948 543 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 GRK4P32298 578 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CYP4Z2PQ8N1L4 340 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CARNMT1Q8N4J0 409 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 SEMA4DQ92854 862 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 LRRC39Q96DD0 335 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CCDC3Q9BQI4 270 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 POLG2Q9UHN1 485 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 OLFM1Q99784 485 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 MXRA8Q9BRK3 442 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 UNKQ9C0B0 810 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 DYRK1BQ9Y463 629 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 E7ENQ6 273 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 INPP4BO15327 924 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 FAM20BO75063 409 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 CLTBP09497 229 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PPP2R1BP30154 601 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 GRK3P35626 688 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 NFIXQ14938 502 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PDPK2PQ6A1A2 396 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 ADGRF2Q8IZF7 708 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RPRD1AQ96P16 312 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 PLA2G12BQ9BX93 195 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 TCF7L2Q9NQB0 619 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 GPRC5DQ9NZD1 345 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RPA1P27694 616 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 THPOP40225 353 aa9.36□□□□□ -0.91
CSMD1-218ENST00000635120 RPL10AP62906 217 aaKnown RBP9.36□□□□□ -0.91
CSMD1-218ENST00000635120 VPS33AQ96AX1 596 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms