RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ADAMTS4O75173 837 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 DAB1O75553 588 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 ZBED1O96006 694 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 LHX1P48742 406 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 CLCNKBP51801 687 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 BBS9Q3SYG4 887 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 MDH1BQ5I0G3 518 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 CLEC20AQ6ZU45 233 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 MGARPQ8TDB4 240 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 LPPQ93052 612 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 FAM149B1Q96BN6 582 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 KCTD15Q96SI1 283 aaPredicted RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 AGO3Q9H9G7 860 aaKnown RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 ARL5CA6NH57 179 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 SSTR1P30872 391 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 NR2C2P49116 596 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 GEMIN4P57678 1058 aaKnown RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 YWHAZP63104 245 aaKnown RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 SP3Q02447 781 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 PRKCZQ05513 592 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 IFT88Q13099 833 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 XRCC4Q13426 336 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 PPP1R21Q6ZMI0 780 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 AGMOQ6ZNB7 445 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 C3orf62Q6ZUJ4 267 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 MRPL10Q7Z7H8 261 aaKnown RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 PSTKQ8IV42 348 aaKnown RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 C10orf67Q8IYJ2 551 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 ANKRD42Q8N9B4 389 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 NT5C3BQ969T7 300 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 CABS1Q96KC9 395 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 CSPG4P5Q96PW8 444 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 LRRC4Q9HBW1 653 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 CRTAC1Q9NQ79 661 aa20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 PSMC3IPQ9P2W1 217 aaPredicted RBP20.48■□□□□ 0.87
PCDHB11-202ENST00000624887 FAM200BP0CF97 657 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 NOS2P35228 1153 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 TRIM32Q13049 653 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 ARHGEF18Q6ZSZ5 1173 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 BNIPLQ7Z465 357 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 PIGWQ7Z7B1 504 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 CDKL3Q8IVW4 592 aaPredicted RBP20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 OTUD6BQ8N6M0 293 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 NDRG1Q92597 394 aaKnown RBP20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 MED10Q9BTT4 135 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 ACSS3Q9H6R3 686 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 RAB6BQ9NRW1 208 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 SENP1Q9P0U3 644 aa20.47■□□□□ 0.87
PCDHB11-202ENST00000624887 MAP3K6O95382 1288 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 ASGR1P07306 291 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 VIMP08670 466 aaKnown RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 RPL9P32969 192 aaKnown RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 MAGEA9P43362 315 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SULT1E1P49888 294 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 CACNB2Q08289 660 aaPredicted RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 DCAF6Q58WW2 860 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 C4orf22Q6V702 233 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 PALM2Q8IXS6 379 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 CKAP2Q8WWK9 683 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SYT15Q9BQS2 421 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 FRMD8Q9BZ67 464 aaPredicted RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 MAGEB5Q9BZ81 275 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 XPNPEP3Q9NQH7 507 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 NKIRAS1Q9NYS0 192 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 RCOR3Q9P2K3 495 aaPredicted RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 FZD10Q9ULW2 581 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 USP3Q9Y6I4 520 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SCNN1GP51170 649 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 CAP1Q01518 475 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 GBE1Q04446 702 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SLC10A2Q12908 348 aaPredicted RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 PKN2Q16513 984 aaKnown RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 KLHL38Q2WGJ6 581 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 OTUD1Q5VV17 481 aaPredicted RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 FAM131BQ86XD5 332 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SIX6OS1Q8N1H7 587 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 C3orf58Q8NDZ4 430 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 SLC2A13Q96QE2 648 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 NPY6RQ99463 290 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 CFHR5Q9BXR6 569 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 NSRP1Q9H0G5 558 aaKnown RBP20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 KRT82Q9NSB4 513 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 DNAH12Q6ZR08 3092 aa20.46■□□□□ 0.87
PCDHB11-202ENST00000624887 FAM47DPA6NHR8 397 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 ZNF623O75123 536 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 ATP2A2P16615 1042 aaKnown RBP20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 THPOP40225 353 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 MAGEA6P43360 314 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 NDUFV1P49821 464 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 MAP3K7CLP57077 242 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 SLC45A4Q5BKX6 768 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 DSTYKQ6XUX3 929 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 KLHDC9Q8NEP7 349 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 FBF1Q8TES7 1133 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 SGSM3Q96HU1 749 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 DHRS4Q9BTZ2 278 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 OSBPL7Q9BZF2 842 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 KLC2Q9H0B6 622 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 PADI3Q9ULW8 664 aa20.45■□□□□ 0.86
PCDHB11-202ENST00000624887 TEX264Q9Y6I9 313 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms