RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 SRPRBQ9Y5M8 271 aaKnown RBP4.2□□□□□ -1.74
KCNMA1-223ENST00000604624 USP42Q9H9J4 1324 aaKnown RBP4.2□□□□□ -1.74
KCNMA1-223ENST00000604624 MED13LQ71F56 2210 aa4.2□□□□□ -1.74
KCNMA1-223ENST00000604624 CCDC189A1A4V9 331 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 F8VZ95 297 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PEX14O75381 377 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SUPT7LO94864 414 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SNRPA1P09661 255 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 MYL2P10916 166 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 GRIK1P39086 918 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 C21orf59P57076 290 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 HIST2H2ACQ16777 129 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TMEM270Q6UE05 265 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CYFIP1Q7L576 1253 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TCAIMQ8N3R3 496 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 MB21D1Q8N884 522 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CNBD1Q8NA66 436 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FAR1Q8WVX9 515 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 COL16A1Q07092 1604 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ESYT3A0FGR9 886 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 INPP4BO15327 924 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ACSL4O60488 711 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 OR5F1O95221 314 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FESP07332 822 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 POLR2MP0CAP2 368 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TFE3P19532 575 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NPY2RP49146 381 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CLK2P49760 499 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ROR1Q01973 937 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 DNASE1L3Q13609 305 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FGD3Q5JSP0 725 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TTC39BQ5VTQ0 682 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 BEND5Q7L4P6 421 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FAM220AQ7Z4H9 259 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CLIP3Q96DZ5 547 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 BATF3Q9NR55 127 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 INTS10Q9NVR2 710 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 LIMA1Q9UHB6 759 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 RAB23Q9ULC3 237 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 R3HDM2Q9Y2K5 976 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PEAK1Q9H792 1746 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 MGAT4DA6NG13 374 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SIN3BO75182 1162 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 RAD51DO75771 328 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CHRNGP07510 517 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SKIV2L2P42285 1042 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 KNOP1Q1ED39 458 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ARHGAP15Q53QZ3 475 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SEL1L3Q68CR1 1132 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 OR2L3Q8NG85 312 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SETD6Q8TBK2 473 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SUN5Q8TC36 379 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 BRSK1Q8TDC3 778 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NSMCE2Q96MF7 247 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CCT8L2Q96SF2 557 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 STN1Q9H668 368 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NEK6Q9HC98 313 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NARFQ9UHQ1 456 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 REXO2Q9Y3B8 237 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 USP15Q9Y4E8 981 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CIB4A0PJX0 185 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ACAP1Q15027 740 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CENPLQ8N0S6 344 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PPP1R13LQ8WUF5 828 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TNFAIP8L1Q8WVP5 186 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 AKAP1Q92667 903 aaKnown RBP eCLIP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TP53INP1Q96A56 240 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FAR2Q96K12 515 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 MEIS3Q99687 375 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 GCOM2Q9BZD3 368 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 OSGEPL1Q9H4B0 414 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ARMC7Q9H6L4 198 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 AS3MTQ9HBK9 375 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 EPB41L4AQ9HCS5 686 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NMRK2Q9NPI5 230 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 EURLQ9NYK6 297 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SERTAD1Q9UHV2 236 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 RABGEF1Q9UJ41 708 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PSMD9O00233 223 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FOXN3O00409 490 aaPredicted RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TAF5LO75529 589 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PCNAP12004 261 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 RPS6KB1P23443 525 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TUFMP49411 452 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TAF2Q6P1X5 1199 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 PLA2G4DQ86XP0 818 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 GLYCTKQ8IVS8 523 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 SPAG16Q8N0X2 631 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 OR5T3Q8NGG3 340 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 RORBQ92753 470 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 FATE1Q969F0 183 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ABCB6Q9NP58 842 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 GGA1Q9UJY5 639 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 MYH1P12882 1939 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 NEDD4P46934 1319 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 ERVV-2B6SEH9 535 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 TRIM38O00635 465 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 DHX15O43143 795 aaKnown RBP4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 GPAA1O43292 621 aa4.19□□□□□ -1.74
KCNMA1-223ENST00000604624 CPB1P15086 417 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms