RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 TNIP3Q96KP6 325 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 RIOK1Q9BRS2 568 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 LSM14BQ9BX40 385 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 PHTF1Q9UMS5 762 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 ADAMTS5Q9UNA0 930 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 RIPK3Q9Y572 518 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 GBF1Q92538 1859 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 ASTN1O14525 1302 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 MFAP3LO75121 409 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 BAG3O95817 575 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 CD4P01730 458 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 AMHP03971 560 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 SLFN5Q08AF3 891 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 FOXL1Q12952 345 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 UBXN2BQ14CS0 331 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ELAVL1Q15717 326 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ATXN7L2Q5T6C5 722 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 DOK3Q7L591 496 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 APBB1IPQ7Z5R6 666 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 D2HGDHQ8N465 521 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 RNF169Q8NCN4 708 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ZFP28Q8NHY6 868 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 HERVK_113Q902F9 699 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ST8SIA2Q92186 375 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 DYNLL2Q96FJ2 89 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 APIPQ96GX9 242 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 SLC39A13Q96H72 371 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 TBCBQ99426 244 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ELAC2Q9BQ52 826 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ADAM7Q9H2U9 754 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 GSTO2Q9H4Y5 243 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 BRD9Q9H8M2 597 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 CERS4Q9HA82 394 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 RSAD1Q9HA92 442 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 KIAA1586Q9HCI6 787 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 STARD7Q9NQZ5 370 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 PIH1D1Q9NWS0 290 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 HECAQ9UBI9 543 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ZFR2Q9UPR6 939 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 SH3BP1Q9Y3L3 701 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 ZNFX1Q9P2E3 1918 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-208ENST00000563911 NCOR1O75376 2440 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 FRS3O43559 492 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 LPXNO60711 386 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 PLATP00750 562 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 ASGR1P07306 291 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 RARBP10826 455 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 ALAS1P13196 640 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 AKR1B1P15121 316 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 HDCP19113 662 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 KCNJ5P48544 419 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 AK2P54819 239 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 SOX8P57073 446 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 NOMO3P69849 1222 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 LONRF1Q17RB8 773 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 GLB1LQ6UWU2 654 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 LCNL1Q6ZST4 164 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 FAM9BQ8IZU0 186 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 FUKQ8N0W3 1084 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 ABRAQ8N0Z2 381 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 KRT78Q8N1N4 520 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 STRBPQ96SI9 672 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 C1QTNF1Q9BXJ1 281 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 XYLT2Q9H1B5 865 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 MROH8Q9H579 483 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 HOXC10Q9NYD6 342 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 DBNLQ9UJU6 430 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 SNX13Q9Y5W8 968 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
HERPUD1-208ENST00000563911 MYH1P12882 1939 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 CYP2D7A0A087X1C5 515 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 RHPN2P1A8MT19 583 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC43A1O75387 559 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 IPO13O94829 963 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 MATN4O95460 622 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 HLA-DOAP06340 250 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 UQCRFS1P1P0C7P4 283 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 FCER1AP12319 257 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 BRAFP15056 766 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 CCL23P55773 120 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 BEX3Q00994 111 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 HHEXQ03014 270 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 PPIGQ13427 754 aaKnown RBP eCLIP6.76□□□□□ -1.333e-8■■■□□ 15
HERPUD1-208ENST00000563911 ALDH1L2Q3SY69 923 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 TMEM31Q5JXX7 168 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 GORABQ5T7V8 394 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 LIMS2Q7Z4I7 341 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 CIR1Q86X95 450 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 AOPEPQ8N6M6 819 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 MB21D1Q8N884 522 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 PCSK9Q8NBP7 692 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 MRGPRX1Q96LB2 322 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 TRPV6Q9H1D0 765 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 ZNF287Q9HBT7 754 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms