RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MMS22LQ6ZRQ5 1243 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 USP51Q70EK9 711 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 LRRTM4Q86VH4 590 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TTC30AQ86WT1 665 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 RAB11FIP4Q86YS3 637 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 CPOQ8IVL8 374 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 OR4N4Q8N0Y3 316 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 SLC44A3Q8N4M1 653 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.93□□□□□ -1.46
SYNE2-210ENST00000553455 CSGALNACT1Q8TDX6 532 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 SLC22A17Q8WUG5 538 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 LINC00476Q8WZB0 136 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 PYM1Q9BRP8 204 aaKnown RBP5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TTPALQ9BTX7 342 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 MECRQ9BV79 373 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 TAF1DQ9H5J8 278 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-210ENST00000553455 ELAC1Q9H777 363 aaKnown RBP5.93□□□□□ -1.46
SYNE2-210ENST00000553455 KCNK9Q9NPC2 374 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 G6PC2Q9NQR9 355 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 GGA3Q9NZ52 723 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 ASAP1Q9ULH1 1129 aa5.93□□□□□ -1.46
SYNE2-210ENST00000553455 EYA2O00167 538 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 NR2F6P10588 404 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 CDK7P50613 346 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 TPTEP56180 551 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 SF3A3Q12874 501 aaKnown RBP eCLIP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 GALNTL6Q49A17 601 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 IGFL4Q6B9Z1 124 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 CCDC70Q6NSX1 233 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 Q6YL49 198 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 Q6ZWC4 215 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 OR6Y1Q8NGX8 325 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 AFG1LQ8WV93 481 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 ASB12Q8WXK4 309 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 HERVK_113Q902F9 699 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 USP13Q92995 863 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 C3orf49Q96BT1 292 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 SDCCAG3Q96C92 435 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 NAP1L4Q99733 375 aaKnown RBP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 EIF2AK1Q9BQI3 630 aaKnown RBP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 DPCDQ9BVM2 203 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 UBA5Q9GZZ9 404 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 MMRN2Q9H8L6 949 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 SEPSECSQ9HD40 501 aaKnown RBP5.92□□□□□ -1.46
SYNE2-210ENST00000553455 VPS45Q9NRW7 570 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 RXFP3Q9NSD7 469 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 NFU1Q9UMS0 254 aa5.92□□□□□ -1.46
SYNE2-210ENST00000553455 A0A1B0GVC2 190 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 GRID2IPA4D2P6 1211 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 SLC38A8A6NNN8 435 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 TISP43B9A030 160 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 M0QYT0 321 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 AP4M1O00189 453 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 CA12O43570 354 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 WDHD1O75717 1129 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 CYP21A2P08686 494 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ELFN1P0C7U0 828 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 CREB1P16220 341 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 CD53P19397 219 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 MPLP40238 635 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 GSTM5P46439 218 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 DGKQP52824 942 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ACTR2P61160 394 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 PSG6Q00889 435 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 PTPAQ15257 358 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 SMAD1Q15797 465 aaKnown RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 TAF12Q16514 161 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 P3H1Q32P28 736 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 KAZNQ674X7 775 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ZNF551Q7Z340 670 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 PEG10Q86TG7 708 aaKnown RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 LRRC71Q8N4P6 559 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 RP9Q8TA86 221 aaKnown RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 OVCA2Q8WZ82 227 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 PRR11Q96HE9 360 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-210ENST00000553455 COQ10AQ96MF6 247 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ABHD16BQ9H3Z7 469 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ARHGEF3Q9NR81 526 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 SERTAD4Q9NUC0 356 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ZNF69Q9UC07 566 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 ZBTB1Q9Y2K1 713 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 PCDHB7Q9Y5E2 793 aa5.91□□□□□ -1.46
SYNE2-210ENST00000553455 FAM90A20PA6NIJ5 464 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 EFCAB8A8MWE9 144 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 NARSO43776 548 aaKnown RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-210ENST00000553455 POLBP06746 335 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 HKR1P10072 659 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 ALADP13716 330 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 ADRA1DP25100 572 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 CNTFP26441 200 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 SERPINA4P29622 427 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 ADRA1BP35368 520 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 PDE1AP54750 535 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 BFSP2Q13515 415 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 DNASE1L3Q13609 305 aa5.9□□□□□ -1.46
SYNE2-210ENST00000553455 C16orf89Q6UX73 402 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms