RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 ZBTB8BQ8NAP8 495 aaPredicted RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 POMGNT2Q8NAT1 580 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 NUP43Q8NFH3 380 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 LINS1Q8NG48 757 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 OR14C36Q8NHC7 312 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 BRIX1Q8TDN6 353 aaKnown RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 SLC22A17Q8WUG5 538 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 FAM162AQ96A26 154 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 CLMNQ96JQ2 1002 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 WDR24Q96S15 920 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 JMJD8Q96S16 334 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 RBM15Q96T37 977 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS29-210ENST00000552130 VRK1Q99986 396 aaPredicted RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 ANKRD2Q9GZV1 360 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 GREM2Q9H772 168 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 G6PC2Q9NQR9 355 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 SNX15Q9NRS6 342 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 TAS2R3Q9NYW6 316 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 PLA2G3Q9NZ20 509 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 AIPL1Q9NZN9 384 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 SCOCQ9UIL1 159 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 DNAJC16Q9Y2G8 782 aa6.7□□□□□ -1.34
VPS29-210ENST00000552130 TIMM13Q9Y5L4 95 aaPredicted RBP6.7□□□□□ -1.34
VPS29-210ENST00000552130 TRBV23OR9-2A0A075B6M9 112 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 SH3D21A4FU49 640 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 CCDC169A6NNP5 214 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MCF2LO15068 1137 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 NKRFO15226 690 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS29-210ENST00000552130 PHF2O75151 1096 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 PRPF6O94906 941 aaKnown RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 CAMTA2O94983 1202 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 CCNDBP1O95273 360 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 OLFM2O95897 454 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 PNPP00491 289 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 UBL4AP11441 157 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 IL1R1P14778 569 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MATR3P43243 847 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS29-210ENST00000552130 BCAT1P54687 386 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 HDAC4P56524 1084 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 STARD6P59095 220 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MVKQ03426 396 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MAPKAPK3Q16644 382 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 TOR1AIP1Q5JTV8 583 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 PLEKHS1Q5SXH7 462 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 WDR93Q6P2C0 686 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 TRAT1Q6PIZ9 186 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 ZC3H14Q6PJT7 736 aaKnown RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 LIPIQ6XZB0 460 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 FAM83HQ6ZRV2 1179 aaPredicted RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 RGS9BPQ6ZS82 235 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MICU3Q86XE3 530 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 RHOT1Q8IXI2 618 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 WDTC1Q8N5D0 677 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 OR6J1Q8NGC5 347 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 NFKBIDQ8NI38 313 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 CEP76Q8TAP6 659 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 SPATA20Q8TB22 786 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 SCFD2Q8WU76 684 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 RAB3IPQ96QF0 476 aaPredicted RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 DMRTA2Q96SC8 542 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 TCHPQ9BT92 498 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 CDADC1Q9BWV3 514 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 DPH1Q9BZG8 443 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 KRT23Q9C075 422 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 AP5M1Q9H0R1 490 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 SLC25A18Q9H1K4 315 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 TP63Q9H3D4 680 aaPredicted RBP6.69□□□□□ -1.34
VPS29-210ENST00000552130 NCOR1P1Q9H4R4 102 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 IMPACTQ9P2X3 320 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 PRSS50Q9UI38 385 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
VPS29-210ENST00000552130 CLRN2A0PK11 232 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 VWA3AA6NCI4 1184 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 FAM171A2A8MVW0 826 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 E7EVH7 732 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 PGRMC2O15173 223 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 DNPH1O43598 174 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 ENTPD3O75355 529 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 FTCDO95954 541 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 PFKMP08237 780 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 VAV1P15498 845 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 PFKLP17858 780 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 EGR1P18146 543 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 IL10P22301 178 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 SDHAP31040 664 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 AMPHP49418 695 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 RPL11P62913 178 aaKnown RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 ZNF200P98182 395 aaPredicted RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 DLX2Q07687 328 aaPredicted RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 PPARAQ07869 468 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 PPP3CAQ08209 521 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 MYO1EQ12965 1108 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 RPA4Q13156 261 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 SLC13A2Q13183 592 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 TNFAIP1Q13829 316 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 TRIM71Q2Q1W2 868 aaKnown RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 DCAF17Q5H9S7 520 aaPredicted RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 RTP2Q5QGT7 225 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms