RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PLK2Q9NYY3 685 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 UXTQ9UBK9 157 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 STK17AQ9UEE5 414 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 CDH9Q9ULB4 789 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 MMP17Q9ULZ9 603 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 EXOC7Q9UPT5 735 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 WASF3Q9UPY6 502 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 IGSF10Q6WRI0 2623 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 KNL1Q8NG31 2342 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 PI4KAP42356 2102 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 FRMD3A2A2Y4 597 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 TBC1D3BA6NDS4 549 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 A8MXQ7 604 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 VNN1O95497 513 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 NFATC1O95644 943 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 OAS1P00973 400 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 HMBSP08397 361 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ADH5P11766 374 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ENGP17813 658 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ADORA2BP29275 332 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 P2RY2P41231 377 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 MAGEA11P43364 429 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 GDF10P55107 478 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SMARCB1Q12824 385 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 MYO1EQ12965 1108 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 CUL4AQ13619 759 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 CUL4BQ13620 913 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 PKP1Q13835 747 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC39A14Q15043 492 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 STK38Q15208 465 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SNRNP35Q16560 246 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 TDRD10Q5VZ19 366 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 C19orf48Q6RUI8 117 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SHC4Q6S5L8 630 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 C4orf50Q6ZRC1 276 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 RASSF3Q86WH2 238 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 CHCHD4Q8N4Q1 142 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 KCTD17Q8N5Z5 321 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ZMIZ2Q8NF64 920 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 NDRG1Q92597 394 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 FBXO32Q969P5 355 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ACDQ96AP0 544 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 HVCN1Q96D96 273 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 LOXL4Q96JB6 756 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SPATA17Q96L03 361 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 PNKPQ96T60 521 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SMOQ99835 787 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 XYLT2Q9H1B5 865 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 ETNK1Q9HBU6 452 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 TMEM9BQ9NQ34 198 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 OLFML3Q9NRN5 406 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 RAB6BQ9NRW1 208 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SEL1LQ9UBV2 794 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 EBF1Q9UH73 591 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 CYP8B1Q9UNU6 501 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 R3HCC1Q9Y3T6 440 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SLCO1B1Q9Y6L6 691 aa7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 HELZP42694 1942 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 GCN1Q92616 2671 aaKnown RBP7.26□□□□□ -1.25
PRPF40B-214ENST00000551320 SMG1Q96Q15 3661 aaKnown RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CCDC163A0A0D9SF12 145 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 LRRIQ3A6PVS8 624 aaPredicted RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PRRT4C9JH25 899 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 TAF4O00268 1085 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CYP26A1O43174 497 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC26A4O43511 780 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PHACTR2O75167 634 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 TULP3O75386 442 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 BMP15O95972 392 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 LDHAP00338 332 aaKnown RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 AVPP01185 164 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 APODP05090 189 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PROS1P07225 676 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 GABRG2P18507 467 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 YWHAQP27348 245 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 NUMBP49757 651 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC5A3P53794 718 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 MAP3K7CLP57077 242 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SIM1P81133 766 aaPredicted RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC7A9P82251 487 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 BIRC3Q13489 604 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 FBXO43Q4G163 708 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 C10orf76Q5T2E6 689 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CCDC73Q6ZRK6 1079 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 EPM2AIP1Q7L775 607 aaPredicted RBP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 FAM35AQ86V20 835 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 NT5DC4Q86YG4 428 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SLC41A1Q8IVJ1 513 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 CCDC65Q8IXS2 484 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 MEIOBQ8N635 442 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 FSIP1Q8NA03 581 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 LINC00301Q8NCQ3 95 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 B3GALNT2Q8NCR0 500 aa7.25□□□□□ -1.25
PRPF40B-214ENST00000551320 OLIG1Q8TAK6 271 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms