RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 H0Y858 1186 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 EPHB6O15197 1021 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 GREM1O60565 184 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 STC2O76061 302 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 FBXO21O94952 628 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 ADH5P11766 374 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 PLA2G5P39877 138 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 UBXN1Q04323 297 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 DHCR24Q15392 516 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 GAB4Q2WGN9 574 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 ZSCAN23Q3MJ62 389 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 TMEM196Q5HYL7 178 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 DGKKQ5KSL6 1271 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 BSPRYQ5W0U4 402 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 FSTL4Q6MZW2 842 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 Q6ZS52 159 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 C1orf210Q8IVY1 113 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 C1orf131Q8NDD1 294 aaKnown RBP13.51□□□□□ -0.25
COL5A1-206ENST00000465877 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 EDEM1Q92611 657 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 CD101Q93033 1021 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 MIS12Q9H081 205 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 LMAN1LQ9HAT1 526 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 ABCC13Q9NSE7 274 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 MARCH2Q9P0N8 246 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 STRIP2Q9ULQ0 834 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 FRYLO94915 3013 aa13.51□□□□□ -0.25
COL5A1-206ENST00000465877 TRDMT1O14717 391 aaKnown RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 LTFP02788 710 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 HMBSP08397 361 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 OPRD1P41143 372 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 ACADSBP45954 432 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 JAM2P57087 298 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 BPIFB4P59827 614 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 GRSF1Q12849 480 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 MTAPQ13126 283 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 GAS6Q14393 721 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 IQCB1Q15051 598 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 MSANTD2Q6P1R3 559 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 Q6ZNB5 142 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 HTR3DQ70Z44 454 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 FMNL3Q8IVF7 1028 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 EPS8L1Q8TE68 723 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 GOLGA1Q92805 767 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 EXOC4Q96A65 974 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 PLD4Q96BZ4 506 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 ERGIC2Q96RQ1 377 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 STK33Q9BYT3 514 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 PRMT8Q9NR22 394 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 FAM86C1Q9NVL1 165 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 CEP83Q9Y592 693 aa13.5□□□□□ -0.25
COL5A1-206ENST00000465877 MUC22E2RYF6 1773 aaPredicted RBP13.5□□□□□ -0.25
COL5A1-206ENST00000465877 SLC12A8A0AV02 714 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 HOXC11O43248 304 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 PAPSS1O43252 624 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 MSI1O43347 362 aaKnown RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 EGFP01133 1207 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 CYP11B1P15538 503 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 DRD1P21728 446 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 CORO1AP31146 461 aaKnown RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 KRT9P35527 623 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 COG7P83436 770 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 LY6G5CQ5SRR4 150 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 C12orf40Q86WS4 652 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 NEK11Q8NG66 645 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 EZH1Q92800 747 aaPredicted RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 FAM149B1Q96BN6 582 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 PIWIL1Q96J94 861 aaKnown RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 CPXM1Q96SM3 734 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 IRF2BPLQ9H1B7 796 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 SPHK2Q9NRA0 654 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
COL5A1-206ENST00000465877 HBS1LQ9Y450 684 aaKnown RBP13.49□□□□□ -0.25
COL5A1-206ENST00000465877 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 RNF40O75150 1001 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 GFPT2O94808 682 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 EIF2DP41214 584 aaKnown RBP13.48□□□□□ -0.25
COL5A1-206ENST00000465877 GALK1P51570 392 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 CCR3P51677 355 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 GAD2Q05329 585 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 KDSRQ06136 332 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 PTPN20Q4JDL3 420 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
COL5A1-206ENST00000465877 TMEM110Q86TL2 294 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms