RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TULP3O75386 442 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 RPP40O75818 363 aaKnown RBP10.67□□□□□ -0.7
SF3A3-204ENST00000462258 STC2O76061 302 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 BRD2P25440 801 aaKnown RBP10.67□□□□□ -0.7
SF3A3-204ENST00000462258 GRIA2P42262 883 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 STILQ15468 1287 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 PREPLQ4J6C6 727 aaPredicted RBP10.67□□□□□ -0.7
SF3A3-204ENST00000462258 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 LCLAT1Q6UWP7 414 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 Q6ZNB5 142 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 TPGS1Q6ZTW0 290 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 TMEM25Q86YD3 366 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 NAT16Q8N8M0 369 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 MLKLQ8NB16 471 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 TSTD1Q8NFU3 115 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 UBA3Q8TBC4 463 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 GAB3Q8WWW8 586 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 TFAP2BQ92481 460 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 KREMEN1Q96MU8 473 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
SF3A3-204ENST00000462258 MED15Q96RN5 788 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 BBS2Q9BXC9 721 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 DNAJC17Q9NVM6 304 aaKnown RBP10.67□□□□□ -0.7
SF3A3-204ENST00000462258 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 MARCH2Q9P0N8 246 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 DEC1Q9P2X7 70 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 STRIP2Q9ULQ0 834 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 MMP17Q9ULZ9 603 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 USP18Q9UMW8 372 aa10.67□□□□□ -0.7
SF3A3-204ENST00000462258 RNF225M0QZC1 329 aaPredicted RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 AXIN1O15169 862 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CACNG3O60359 315 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 ABCB7O75027 752 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CALCAP01258 141 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 RETP07949 1114 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 HMBSP08397 361 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 KRT5P13647 590 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 TYRP14679 529 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CORO1AP31146 461 aaKnown RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 TIE1P35590 1138 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 RGS7P49802 495 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 COG7P83436 770 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 TPD52L1Q16890 204 aaPredicted RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 PM20D1Q6GTS8 502 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CREBRFQ8IUR6 639 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CCDC33Q8N5R6 958 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 FAM160A2Q8N612 972 aaPredicted RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 GPR161Q8N6U8 529 aaKnown RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 KCTD13Q8WZ19 329 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 XPO6Q96QU8 1125 aaKnown RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 ZSWIM1Q9BR11 485 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 CNGB3Q9NQW8 809 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 OLA1Q9NTK5 396 aaKnown RBP10.66□□□□□ -0.7
SF3A3-204ENST00000462258 DACH1Q9UI36 760 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
SF3A3-204ENST00000462258 SLC12A8A0AV02 714 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 YJEFN3A6XGL0 299 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 E7ENQ6 273 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 SGK1O00141 431 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 PIK3R2O00459 728 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TRIM24O15164 1050 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 KLF8O95600 359 aaPredicted RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 LCP1P13796 627 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TNFRSF4P43489 277 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 KIR2DL1P43626 348 aaPredicted RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 MTIF2P46199 727 aaKnown RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 ID4P47928 161 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 DGKEP52429 567 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 DAOAP59103 153 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 CNGA2Q16280 664 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 CRY1Q16526 586 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 HSF5Q4G112 596 aaPredicted RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 ANO7Q6IWH7 933 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TRIM65Q6PJ69 517 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 ENOSF1Q7L5Y1 443 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 CACNA2D4Q7Z3S7 1137 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 FMNL3Q8IVF7 1028 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 SCML4Q8N228 414 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 IL17RCQ8NAC3 791 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TXNDC5Q8NBS9 432 aaKnown RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 RNF139Q8WU17 664 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 NDRG1Q92597 394 aaKnown RBP10.65□□□□□ -0.7
SF3A3-204ENST00000462258 BHMTQ93088 406 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 PLD4Q96BZ4 506 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 CRACR2AQ9BSW2 395 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 TPSD1Q9BZJ3 242 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 DCLK3Q9C098 648 aa10.65□□□□□ -0.7
SF3A3-204ENST00000462258 PARD6AQ9NPB6 346 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms