RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 KHSRPQ92945 711 aaKnown RBP eCLIP6.56□□□□□ -1.365e-7■■□□□ 13.6
PUM1-207ENST00000440538 CHMP6Q96FZ7 201 aa6.56□□□□□ -1.36
PUM1-207ENST00000440538 XPO6Q96QU8 1125 aaKnown RBP6.56□□□□□ -1.36
PUM1-207ENST00000440538 CRISPLD1Q9H336 500 aa6.56□□□□□ -1.36
PUM1-207ENST00000440538 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
PUM1-207ENST00000440538 A6NNZ2 444 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 UBOX5O94941 541 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ANXA13P27216 316 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 LRPAP1P30533 357 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 BMPR1AP36894 532 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 LHX1P48742 406 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TKTL1P51854 596 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 JAM2P57087 298 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 RPL7AP62424 266 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 CLDN10P78369 228 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ROR1Q01973 937 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TUBB8Q3ZCM7 444 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 DCAF6Q58WW2 860 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 KCNT1Q5JUK3 1230 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TDHQ8IZJ6 230 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TAB3Q8N5C8 712 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 ARFGAP2Q8N6H7 521 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 CCDC197Q8NCU1 140 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TIFAQ96CG3 184 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 CORO1BQ9BR76 489 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 PLCD4Q9BRC7 762 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TLE6Q9H808 572 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 CYTH4Q9UIA0 394 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ANAPC7Q9UJX3 599 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 EPOPA6NHQ4 379 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SPOPO43791 374 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 BAIAP3O94812 1187 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 PFKMP08237 780 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 BPIFB4P59827 614 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 NTHL1P78549 312 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 RAB6CQ53S08 254 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 EMC10Q5UCC4 262 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 DNAJC24Q6P3W2 148 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 CD300LGQ6UXG3 332 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 FAM35AQ86V20 835 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 NT5DC4Q86YG4 428 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 LRRN4Q8WUT4 740 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 HERVK_113Q902F9 699 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SLC9A7Q96T83 725 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 FAM118BQ9BPY3 351 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 NUP85Q9BW27 656 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ULBP1Q9BZM6 244 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 RAB6CQ9H0N0 254 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 ZWILCHQ9H900 591 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 DERAQ9Y315 318 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SNX24Q9Y343 169 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 WDR27A2RRH5 827 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 O00370 1275 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 MED7O43513 233 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 EPCAMP16422 314 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 PLTPP55058 493 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 TAP1Q03518 808 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SLC18A3Q16572 532 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 PTPN20Q4JDL3 420 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 LACTB2Q53H82 288 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 FIGNQ5HY92 759 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SH3PXD2AQ5TCZ1 1133 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 LIN9Q5TKA1 542 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 DPY19L2P1Q6NXN4 242 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 ADGRD2Q7Z7M1 963 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 EGFL6Q8IUX8 553 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SLC39A11Q8N1S5 342 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SPDYE1Q8NFV5 336 aaPredicted RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 EPS8L3Q8TE67 593 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 C18orf8Q96DM3 657 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 RTP3Q9BQQ7 232 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 SMG9Q9H0W8 520 aaKnown RBP6.55□□□□□ -1.36
PUM1-207ENST00000440538 HCFC1R1Q9NWW0 138 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 C15orf41Q9Y2V0 281 aa6.55□□□□□ -1.36
PUM1-207ENST00000440538 EFCAB14O75071 495 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 ERBB2P04626 1255 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 KRT16P08779 473 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 VDRP11473 427 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 NCAM1P13591 858 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 SARNPP82979 210 aaKnown RBP6.54□□□□□ -1.36
PUM1-207ENST00000440538 ZKSCAN8Q15776 578 aaPredicted RBP6.54□□□□□ -1.36
PUM1-207ENST00000440538 INTS6LQ5JSJ4 861 aaKnown RBP6.54□□□□□ -1.36
PUM1-207ENST00000440538 KAZNQ674X7 775 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 HFE2Q6ZVN8 426 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 ENOSF1Q7L5Y1 443 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 FMNL3Q8IVF7 1028 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 CCDC50Q8IVM0 306 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 HOMEZQ8IX15 550 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 RNF25Q96BH1 459 aaPredicted RBP6.54□□□□□ -1.36
PUM1-207ENST00000440538 CFAP57Q96MR6 1250 aa6.54□□□□□ -1.36
PUM1-207ENST00000440538 TGS1Q96RS0 853 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms