RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SLC45A4Q5BKX6 768 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 FAXCQ5TGI0 409 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 C17orf99Q6UX52 265 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 TRPM8Q7Z2W7 1104 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 PIGZQ86VD9 579 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ARRDC4Q8NCT1 418 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 CENPIQ92674 756 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 CYTH2Q99418 400 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 MTG1Q9BT17 334 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 DUSP16Q9BY84 665 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 PRDM16Q9HAZ2 1276 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 USP29Q9HBJ7 922 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 STAP1Q9ULZ2 295 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ARL2BPQ9Y2Y0 163 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 TDRD15B5MCY1 1934 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 A0A1W2PPM1 405 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 PTGESO14684 152 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 STK10O94804 968 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MAP3K6O95382 1288 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 ASMTLO95671 621 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MT-ND3P03897 115 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 INHBAP08476 426 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 GSTA2P09210 222 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 RARBP10826 455 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 NPR3P17342 541 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 TAC1P20366 129 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 AMPD1P23109 780 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 ACAT1P24752 427 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 FOXN2P32314 431 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MATKP42679 507 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 NR2C2P49116 596 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 ATXN1P54253 815 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 WDR4P57081 412 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 LILRA4P59901 499 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 SLC20A2Q08357 652 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 PTK7Q13308 1070 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MTM1Q13496 603 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MTFR1Q15390 333 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 MDH1BQ5I0G3 518 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 SYCP2LQ5T4T6 812 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 WSCD1Q658N2 575 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 HEATR6Q6AI08 1181 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 DSTYKQ6XUX3 929 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 BZW1Q7L1Q6 419 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 LIMS2Q7Z4I7 341 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 CCDC185Q8N715 623 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 CCDC110Q8TBZ0 833 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 DENND1AQ8TEH3 1009 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 DCAKDQ8WVC6 231 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 QKIQ96PU8 341 aaKnown RBP eCLIP10.82□□□□□ -0.686e-7■■■□□ 15.2
CPNE1-218ENST00000439806 CSPG4P5Q96PW8 444 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 PPP1R10Q96QC0 940 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 FERMT1Q9BQL6 677 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 DHRS4Q9BTZ2 278 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 C11orf84Q9BUA3 381 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 PITPNM3Q9BZ71 974 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 KIF9Q9HAQ2 790 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 ETNK1Q9HBU6 452 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 RCOR3Q9P2K3 495 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 FZD10Q9ULW2 581 aa10.82□□□□□ -0.68
CPNE1-218ENST00000439806 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
CPNE1-218ENST00000439806 SCN10AQ9Y5Y9 1956 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 HACD1B0YJ81 288 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 DNM1LO00429 736 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 CLDN5O00501 218 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 GCATO75600 419 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FBXO21O94952 628 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FAM200BP0CF97 657 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 ALADP13716 330 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TPSB2P20231 275 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 HOXC8P31273 242 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 NOS2P35228 1153 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 RPA3P35244 121 aaPredicted RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 MAGEA6P43360 314 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SARNPP82979 210 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 DEUP1Q05D60 604 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 TPSAB1Q15661 275 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SLC1A5Q15758 541 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SPRED3Q2MJR0 410 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 SLC25A52Q3SY17 297 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 MFSD14CQ5VZR4 134 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 CST9Q5W186 159 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FBXW10Q5XX13 1052 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 NCBP2-AS2Q69YL0 99 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 LVRNQ6Q4G3 990 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FAM47EQ6ZV65 393 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FAM131BQ86XD5 332 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
CPNE1-218ENST00000439806 PSTKQ8IV42 348 aaKnown RBP10.81□□□□□ -0.68
CPNE1-218ENST00000439806 FUKQ8N0W3 1084 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms