RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 AMIGO2Q86SJ2 522 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 IPO4Q8TEX9 1081 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 POF1BQ8WVV4 589 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 NELL1Q92832 810 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 C18orf8Q96DM3 657 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ZNF764Q96H86 408 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 LENG8Q96PV6 779 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 WDR24Q96S15 920 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 NUDT22Q9BRQ3 303 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 HELLSQ9NRZ9 838 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 WNT6Q9Y6F9 365 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 KAT6AQ92794 2004 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 AOX1Q06278 1338 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ZSCAN9O15535 394 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 PROP1O75360 226 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 JTBO76095 146 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 FGAP02671 866 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 HNRNPCP07910 306 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 ADRA1DP25100 572 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 FAM83BQ5T0W9 1011 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TMTC4Q5T4D3 741 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 RASGRP3Q8IV61 690 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 REPS1Q96D71 796 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 DAZAP1Q96EP5 407 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 TFCP2L1Q9NZI6 479 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 MGAT4CQ9UBM8 478 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
TRAPPC13-204ENST00000438419 CBFA2T3O75081 653 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 TCEA3O75764 348 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 MCM5P33992 734 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 DIO1P49895 249 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 CYP4F2P78329 520 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 TXNL4AP83876 142 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 PSG6Q00889 435 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 MTAPQ13126 283 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 FHL3Q13643 280 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 TRIM14Q14142 442 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 PUM3Q15397 648 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 TRIM71Q2Q1W2 868 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 ANO1Q5XXA6 986 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 SUMO4Q6EEV6 95 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 NAPRTQ6XQN6 538 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 TRIM72Q6ZMU5 477 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 GATAD2AQ86YP4 633 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 PNPLA1Q8N8W4 532 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 FAM71BQ8TC56 605 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 SNX18Q96RF0 628 aa4.28□□□□□ -1.72
TRAPPC13-204ENST00000438419 ARHGEF17Q96PE2 2063 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 TARM1B6A8C7 271 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 H7C1Q1 480 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 SYT5O00445 386 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 PIP5K1BO14986 540 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 PPFIA2O75334 1257 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 PDE8BO95263 885 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 NTSR2O95665 410 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 NPPBP16860 134 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 FBLP22087 321 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 FPR3P25089 353 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 YY1P25490 414 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 ALDH18A1P54886 795 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 HOXA4Q00056 320 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 TFF2Q03403 129 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 LMAN2Q12907 356 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 BLMHQ13867 455 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 SPARCL1Q14515 664 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 ZRSR2Q15696 482 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 ZACNQ401N2 412 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 DPY19L2P1Q6NXN4 242 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 ERAP2Q6P179 960 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 KIRREL2Q6UWL6 708 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 P3H2Q8IVL5 708 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 TERB1Q8NA31 727 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 OVCA2Q8WZ82 227 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 MMS19Q96T76 1030 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 PRPF18Q99633 342 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 MACROD1Q9BQ69 325 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 CINPQ9BW66 212 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 CIPCQ9C0C6 399 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 OBP2BQ9NPH6 170 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 RXFP3Q9NSD7 469 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 PTGFRNQ9P2B2 879 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 IGSF9Q9P2J2 1179 aa4.27□□□□□ -1.73
TRAPPC13-204ENST00000438419 WIPF3A6NGB9 483 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 AQP12BA6NM10 295 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 J3KTA2 159 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PCDH17O14917 1159 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 NPC1O15118 1278 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 CREB3O43889 395 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 ITGA5P08648 1049 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 NHLRC4P0CG21 123 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 ZNF37AP17032 561 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms