RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 KRT72Q14CN4 511 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SLC44A4Q53GD3 710 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 KDELC2Q7Z4H8 507 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 GPR141Q7Z602 305 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 DDHD1Q8NEL9 900 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 ZKSCAN4Q969J2 545 aaPredicted RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 DNAJC19Q96DA6 116 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 SHCBP1LQ9BZQ2 653 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 NRDE2Q9H7Z3 1164 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 AGO4Q9HCK5 861 aaKnown RBP8.65□□□□□ -1.02
VPS36-201ENST00000378060 DPP3Q9NY33 737 aa8.65□□□□□ -1.02
VPS36-201ENST00000378060 NCANO14594 1321 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 CCDC78A2IDD5 438 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 CLASP2O75122 1294 aaKnown RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 ABHD2P08910 425 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 RBP1P09455 135 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 MYBL2P10244 700 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 SHMT1P34896 483 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 GRIK1P39086 918 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 TMED10P49755 219 aaKnown RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 MMP14P50281 582 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 JAG1P78504 1218 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 LRRC38Q5VT99 294 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 RNF43Q68DV7 783 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 DUPD1Q68J44 220 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 MRNIPQ6NTE8 343 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 DNAAF5Q86Y56 855 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 SLC9A9Q8IVB4 645 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 KYQ8NBH2 561 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 RXFP2Q8WXD0 754 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 ZBTB10Q96DT7 871 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 OXNAD1Q96HP4 312 aaPredicted RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 KATNAL1Q9BW62 490 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 DRG1Q9Y295 367 aaKnown RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 FAM32AQ9Y421 112 aaKnown RBP8.65□□□□□ -1.03
VPS36-201ENST00000378060 MYH8P13535 1937 aa8.65□□□□□ -1.03
VPS36-201ENST00000378060 EVPLLA8MZ36 301 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 UNC5CO95185 931 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 KRT8P05787 483 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 SLC2A3P11169 496 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 TSHRP16473 764 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 TCF7P36402 384 aaPredicted RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 BCAT1P54687 386 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 BTKQ06187 659 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 MPP3Q13368 585 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 ZNF484Q5JVG2 852 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 ZFP1Q6P2D0 407 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 RRM2BQ7LG56 351 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 PATL1Q86TB9 770 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 ARHGEF19Q8IW93 802 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 OTUB1Q96FW1 271 aaPredicted RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 TMEM176AQ96HP8 235 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 RMDN2Q96LZ7 410 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 CNBD2Q96M20 576 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 LRRC19Q9H756 370 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 DDX28Q9NUL7 540 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 A0A0U1RQJ8 604 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 GOLGA8TH3BQL2 631 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 M0QYT0 321 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 FCGR1AP12314 374 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 NCAM1P13591 858 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 CPB1P15086 417 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 GP5P40197 560 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 CDK7P50613 346 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 ATXN3P54252 364 aaPredicted RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 MYL6P60660 151 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 CDK16Q00536 496 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 PRKAA1Q13131 559 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 VEPH1Q14D04 833 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 PKN2Q16513 984 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 CCDC153Q494R4 210 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 LAYNQ6UX15 382 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 MFSD7Q6UXD7 560 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 LRRC74BQ6ZQY2 392 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 NOP9Q86U38 636 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 TAGAPQ8N103 731 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 C2orf69Q8N8R5 385 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 HES6Q96HZ4 224 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 FAM86B1E9PN63 330 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 SUPT7LO94864 414 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 FAM86B2P0C5J1 330 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 DRD4P21917 467 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 EIF4BP23588 611 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 SKIV2L2P42285 1042 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 MRPS15P82914 257 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 PTK2BQ14289 1009 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 SPDYAQ5MJ70 313 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 PDPK2PQ6A1A2 396 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 KYAT3Q6YP21 454 aaKnown RBP8.64□□□□□ -1.03
VPS36-201ENST00000378060 DENND5BQ6ZUT9 1274 aa8.64□□□□□ -1.03
VPS36-201ENST00000378060 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms