RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 STRNO43815 780 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 B4GALT4O60513 344 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 MGAT1P26572 445 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 FDFT1P37268 417 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 AVPR1AP37288 418 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 GLRBP48167 497 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 SERPINB4P48594 390 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 YWHAZP63104 245 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 NXF3Q9H4D5 531 aaKnown RBP8.75□□□□□ -1.01
PTPRK-206ENST00000368215 GLI3P10071 1580 aa8.75□□□□□ -1.01
PTPRK-206ENST00000368215 GOLGA8TH3BQL2 631 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TRPA1O75762 1119 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 RGS20O76081 388 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ANP32DO95626 131 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 APOEP02649 317 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 CDKN2BP42772 138 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 OR1G1P47890 313 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MTFR1Q15390 333 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 HABP4Q5JVS0 413 aaKnown RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ANKRD22Q5VYY1 191 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 GSDMBQ8TAX9 411 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 HTR3CQ8WXA8 447 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TLCD1Q96CP7 247 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TBCBQ99426 244 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TINF2Q9BSI4 451 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 SARS2Q9NP81 518 aaKnown RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 A0A1B0GUL6 1792 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 UBA6A0AVT1 1052 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 THP07101 528 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ETFBP38117 255 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 HIC1Q14526 733 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MFSD10Q14728 455 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 RABGAP1LQ5R372 815 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TAS1R3Q7RTX0 852 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 XYLT1Q86Y38 959 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 USP6NLQ92738 828 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 C12orf42Q96LP6 360 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TUBGCP4Q9UGJ1 667 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 HMGXB4Q9UGU5 601 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 NUDT5Q9UKK9 219 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 DDX60Q8IY21 1712 aaKnown RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 COL4A1P02462 1669 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 BTAF1O14981 1849 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 RNF103O00237 685 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 CLDN5O00501 218 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MSCO60682 206 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 DGKIO75912 1065 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 SETSIPP0DME0 302 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TAC1P20366 129 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 KCNA4P22459 653 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 SERPINB3P29508 390 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 NSUN2Q08J23 767 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 KIF19Q2TAC6 998 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 WSCD1Q658N2 575 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TSHZ1Q6ZSZ6 1077 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 POLNQ7Z5Q5 900 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TRABD2AQ86V40 505 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 CYP4X1Q8N118 509 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 CNPY4Q8N129 248 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 GLIS1Q8NBF1 620 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 NDRG1Q92597 394 aaKnown RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MTBPQ96DY7 904 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 LRGUKQ96M69 825 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 GAD1Q99259 594 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 SYT15Q9BQS2 421 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 YIPF3Q9GZM5 350 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MINDY3Q9H8M7 445 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ETNK2Q9NVF9 386 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 NDE1Q9NXR1 346 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 DNAJC16Q9Y2G8 782 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ALOX15BO15296 676 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 TM9SF1O15321 606 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 MLH1P40692 756 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ELF3P78545 371 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 SH3PXD2AQ5TCZ1 1133 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ZNF410Q86VK4 478 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 C12orf50Q8NA57 414 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ELMO2Q96JJ3 720 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 NUF2Q9BZD4 464 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 OSBPL7Q9BZF2 842 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 ADA2Q9NZK5 511 aa8.74□□□□□ -1.01
PTPRK-206ENST00000368215 PAPPAQ13219 1627 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 AIM2O14862 343 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 ELF1P32519 619 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PAPOLAP51003 745 aaKnown RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 ACAP1Q15027 740 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 C4orf22Q6V702 233 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PIGZQ86VD9 579 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 SLC4A11Q8NBS3 891 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PPHLN1Q8NEY8 458 aaKnown RBP8.73□□□□□ -1.01
PTPRK-206ENST00000368215 PIP4K2CQ8TBX8 421 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 URGCPQ8TCY9 931 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 LGMNQ99538 433 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 SERPINI1Q99574 410 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 ULBP1Q9BZM6 244 aa8.73□□□□□ -1.01
PTPRK-206ENST00000368215 IARS2Q9NSE4 1012 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms