RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 URGCPQ8TCY9 931 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 TMEM209Q96SK2 561 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 RHOBTB2Q9BYZ6 727 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 PITPNM1O00562 1244 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 CYP2F1P24903 491 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 BCAR1P56945 870 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 PM20D1Q6GTS8 502 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 C1orf228Q6PIY5 440 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 KDM7AQ6ZMT4 941 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 CEP128Q6ZU80 1094 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 PCGF5Q86SE9 256 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 HOOK3Q86VS8 718 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 FAM131BQ86XD5 332 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 SCML4Q8N228 414 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 DBF4BQ8NFT6 615 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 KCTD15Q96SI1 283 aaPredicted RBP22.21■■□□□ 1.15
GFRA3-201ENST00000274721 USP29Q9HBJ7 922 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 SHOC2Q9UQ13 582 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 NAALADL1Q9UQQ1 740 aa22.21■■□□□ 1.15
GFRA3-201ENST00000274721 SHOX2O60902 331 aaPredicted RBP22.2■■□□□ 1.14
GFRA3-201ENST00000274721 ZBED1O96006 694 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 USP17L7P0C7H9 530 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 BDNFP23560 247 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 DMTNQ08495 405 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 CROCCP2Q86T23 111 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 FAM71DQ8N9W8 422 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 PGM2Q96G03 612 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 RBM15Q96T37 977 aaKnown RBP eCLIP22.2■■□□□ 1.14
GFRA3-201ENST00000274721 CENPHQ9H3R5 247 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 PNPLA8Q9NP80 782 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 DNAJC17Q9NVM6 304 aaKnown RBP22.2■■□□□ 1.14
GFRA3-201ENST00000274721 USP3Q9Y6I4 520 aa22.2■■□□□ 1.14
GFRA3-201ENST00000274721 M0QYT0 321 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 RDXP35241 583 aaKnown RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 ROR1Q01973 937 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 YWHAHQ04917 246 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 KYNUQ16719 465 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 ZC3H18Q86VM9 953 aaKnown RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 TET1Q8NFU7 2136 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 PRCCQ92733 491 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 CSPG4P5Q96PW8 444 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 SLC9A7Q96T83 725 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 DMAP1Q9NPF5 467 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 NINJ2Q9NZG7 142 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 CWC15Q9P013 229 aaKnown RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 RCOR3Q9P2K3 495 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 PTPRDP23468 1912 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 OAZ2O95190 189 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 NR1D1P20393 614 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 GLIPR1L2Q4G1C9 344 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 DARS2Q6PI48 645 aaKnown RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 IRGQQ8WZA9 623 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 CPT1BQ92523 772 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 TLCD1Q96CP7 247 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 RTP4Q96DX8 246 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 PGAP3Q96FM1 320 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 ROPN1BQ9BZX4 212 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 ROPN1Q9HAT0 212 aaPredicted RBP22.19■■□□□ 1.14
GFRA3-201ENST00000274721 OGDHLQ9ULD0 1010 aa22.19■■□□□ 1.14
GFRA3-201ENST00000274721 LTFP02788 710 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 ZFXP17010 805 aaPredicted RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 CTCFP49711 727 aaPredicted RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 TSPY1Q01534 308 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 MTFR1Q15390 333 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 PYROXD2Q8N2H3 581 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 NAT8LQ8N9F0 302 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 DEFB118Q96PH6 123 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 PIGVQ9NUD9 493 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 DNAJB4Q9UDY4 337 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 NLRC5Q86WI3 1866 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 BCLAF3A2AJT9 711 aaKnown RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 ACSL3O95573 720 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 NR2C2P49116 596 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 DNAJC21Q5F1R6 531 aaKnown RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 C6orf118Q5T5N4 469 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 PPIL6Q8IXY8 311 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 CRIPAKQ8N1N5 446 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 UHMK1Q8TAS1 419 aaKnown RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 PRDM16Q9HAZ2 1276 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 WDR6Q9NNW5 1121 aaKnown RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 RRN3Q9NYV6 651 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 NOVA2Q9UNW9 492 aaKnown RBP22.18■■□□□ 1.14
GFRA3-201ENST00000274721 HEY1Q9Y5J3 304 aa22.18■■□□□ 1.14
GFRA3-201ENST00000274721 COL4A4P53420 1690 aaPredicted RBP22.17■■□□□ 1.14
GFRA3-201ENST00000274721 H7C0C1 242 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 CAPN9O14815 690 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 CAPN2P17655 700 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 MAGEA4P43358 317 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 OR1G1P47890 313 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 ATP5OP48047 213 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 RNASELQ05823 741 aaKnown RBP22.17■■□□□ 1.14
GFRA3-201ENST00000274721 DEUP1Q05D60 604 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 TNFAIP8L3Q5GJ75 292 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 CTU1Q7Z7A3 348 aaKnown RBP22.17■■□□□ 1.14
GFRA3-201ENST00000274721 TTC3P53804 2025 aa22.17■■□□□ 1.14
GFRA3-201ENST00000274721 CFAP69A5D8W1 941 aa22.16■■□□□ 1.14
GFRA3-201ENST00000274721 A6NNZ2 444 aa22.16■■□□□ 1.14
GFRA3-201ENST00000274721 SMAPO00193 183 aa22.16■■□□□ 1.14
GFRA3-201ENST00000274721 AIF1P55008 147 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms