RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 PPP2R3CQ969Q6 453 aa12.49□□□□□ -0.41
VPS45-212ENST00000611412 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
VPS45-212ENST00000611412 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
VPS45-212ENST00000611412 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
VPS45-212ENST00000611412 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS45-212ENST00000611412 PACSIN2Q9UNF0 486 aaPredicted RBP12.49□□□□□ -0.41
VPS45-212ENST00000611412 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 FAM92AA1XBS5 289 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 GOLGA6L9A6NEM1 432 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 MDM4O15151 490 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
VPS45-212ENST00000611412 TADA3O75528 432 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 DAB1O75553 588 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 MTA2O94776 668 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 TBX18O95935 607 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 DNA2P51530 1060 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 GNG11P61952 73 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 KCNC3Q14003 757 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 MON1AQ86VX9 555 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 TMC8Q8IU68 726 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
VPS45-212ENST00000611412 PRRC2BQ5JSZ5 2229 aaKnown RBP12.48□□□□□ -0.41
VPS45-212ENST00000611412 NCK2O43639 380 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 KIF5CO60282 957 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 RARGP13631 454 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TCF4P15884 667 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 GABRR2P28476 465 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 SSR1P43307 286 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 SULT1E1P49888 294 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 CYP4F8P98187 520 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TCEAL1Q15170 157 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 RARS2Q5T160 578 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 GRASPQ7Z6J2 395 aaPredicted RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 TMEM150AQ86TG1 271 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 SCML4Q8N228 414 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 SLC2A13Q96QE2 648 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TBCBQ99426 244 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 IL21Q9HBE4 155 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 SFMBT1Q9UHJ3 866 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 A0A1W2PRU2 124 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 GLI1P08151 1106 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 COMTP21964 271 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 SDC4P31431 198 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 NOS2P35228 1153 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 GJC1P36383 396 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 SCNN1AP37088 669 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 CCR2P41597 374 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 MATKP42679 507 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 NME3Q13232 169 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 GAREM2Q75VX8 874 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 RSRC2Q7L4I2 434 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 LRRC57Q8N9N7 239 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TRMT2BQ96GJ1 504 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 MYRFLQ96LU7 910 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 CEP295NLQ96MC4 621 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 WDR24Q96S15 920 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
VPS45-212ENST00000611412 LRRC3Q9BY71 257 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 PIDD1Q9HB75 910 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TRPC7Q9HCX4 862 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 ABCC13Q9NSE7 274 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 COMMD8Q9NX08 183 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 ASB3Q9Y575 518 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 ALG6Q9Y672 507 aa12.47□□□□□ -0.41
VPS45-212ENST00000611412 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 C2orf78A6NCI8 922 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 M0QYT0 321 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 ENC1O14682 589 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 MSI1O43347 362 aaKnown RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 PROSCO94903 275 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 F11P03951 625 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 ZNF143P52747 638 aaPredicted RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 DLX2Q07687 328 aaPredicted RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 EFEMP1Q12805 493 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 IFI16Q16666 785 aaKnown RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
VPS45-212ENST00000611412 ARFGAP1Q8N6T3 406 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 EFHBQ8N7U6 833 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 RNF139Q8WU17 664 aa12.46□□□□□ -0.41
VPS45-212ENST00000611412 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms