RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 TDRPQ86YL5 185 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 RNF148Q8N7C7 305 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 LRRC15Q8TF66 581 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 NKX1-2Q9UD57 310 aaPredicted RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 TIMM44O43615 452 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 TCEA3O75764 348 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 MTA2O94776 668 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 IL18RAPO95256 599 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 TGM2P21980 687 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 KDELR1P24390 212 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 MRPS22P82650 360 aaKnown RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 ORC1Q13415 861 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 DSTYKQ6XUX3 929 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 RTKN2Q8IZC4 609 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 NUP93Q8N1F7 819 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 RBM15BQ8NDT2 890 aaKnown RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 RNF217Q8TC41 542 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 FAM151AQ8WW52 585 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 RXFP2Q8WXD0 754 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 LRRC39Q96DD0 335 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 EIF2AQ9BY44 585 aaKnown RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 GAKO14976 1311 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 SULT1E1P49888 294 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 ARHGDIAP52565 204 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 TPI1P60174 286 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 SLC5A9Q2M3M2 681 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 DGCR14Q96DF8 476 aaKnown RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 WDR18Q9BV38 432 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 COPS7BQ9H9Q2 264 aaPredicted RBP15.11■□□□□ 0.01
VPS36-207ENST00000611132 FAM49BQ9NUQ9 324 aa15.11■□□□□ 0.01
VPS36-207ENST00000611132 hCG_1818297A0A087WSY0 165 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 A0A0B4J269 797 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 MAGEC1O60732 1142 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TM7SF2O76062 418 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 USP1O94782 785 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 UQCRBP14927 111 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 C16orf46Q6P387 395 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 SNX32Q86XE0 403 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 CLEC4FQ8N1N0 589 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 MAGEB5Q9BZ81 275 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 VAV3Q9UKW4 847 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 XIAPP98170 497 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 RBM44Q6ZP01 1051 aaKnown RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 MKL1Q969V6 931 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 LENG1Q96BZ8 264 aaPredicted RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 IL1RL2Q9HB29 575 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 MYRFQ9Y2G1 1151 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 RGPD1P0DJD0 1748 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 PRR5-ARHGAP8B1AHC4 643 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TGDSO95455 350 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 SNHG28P0DPA3 235 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 RPL7AP62424 266 aaKnown RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 NOMO3P69849 1222 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 ARHGAP8P85298 464 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 UBAP2LQ14157 1087 aaKnown RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 TMEM132DQ14C87 1099 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TAF12Q16514 161 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 UCMAQ8WVF2 138 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 ELMO2Q96JJ3 720 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TMCO1Q9UM00 188 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TRIM13O60858 407 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 SLC4A1P02730 911 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 OATP04181 439 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 FASTKD3Q14CZ7 662 aaKnown RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 ACSBG2Q5FVE4 666 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 RFWD3Q6PCD5 774 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 TSHZ1Q6ZSZ6 1077 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 ARCQ7LC44 396 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 STRA8Q7Z7C7 330 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 PHF13Q86YI8 300 aaPredicted RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 CEP19Q96LK0 163 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
VPS36-207ENST00000611132 LRRC40Q9H9A6 602 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 GPAMQ9HCL2 828 aa15.1■□□□□ 0.01
VPS36-207ENST00000611132 NFIBO00712 420 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 ECHS1P30084 290 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 MIPP30301 263 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 ABCE1P61221 599 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 BBS12Q6ZW61 710 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 WDR49Q8IV35 697 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 C12orf56Q8IXR9 622 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 PPHLN1Q8NEY8 458 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 FAM172AQ8WUF8 416 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 LRRC42Q9Y546 428 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 TCRBV9S1A1TA0A576 114 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 MAGEB2O15479 319 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 EIF4BP23588 611 aaKnown RBP15.09■□□□□ 0.01
VPS36-207ENST00000611132 HMOX2P30519 316 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 GP5P40197 560 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 CDK7P50613 346 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 WASHC5Q12768 1159 aa15.09■□□□□ 0.01
VPS36-207ENST00000611132 KYAT1Q16773 422 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms