RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 PTPROQ16827 1216 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 TCTN1Q2MV58 587 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 TRIM71Q2Q1W2 868 aaKnown RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 KRT71Q3SY84 523 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 SGO2Q562F6 1265 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 NAA35Q5VZE5 725 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 FAM109BQ6ICB4 259 aaPredicted RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 NOTUMQ6P988 496 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 DRICH1Q6PGQ1 229 aaPredicted RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 TMEM270Q6UE05 265 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 ZDHHC24Q6UX98 284 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 TAOK1Q7L7X3 1001 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 SERINC5Q86VE9 423 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 HACE1Q8IYU2 909 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 UBR7Q8N806 425 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 NIPA2Q8N8Q9 360 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 IPO4Q8TEX9 1081 aaKnown RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 DNAJB3Q8WWF6 145 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 CPA5Q8WXQ8 436 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 TLCD1Q96CP7 247 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 C18orf8Q96DM3 657 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 CYFIP2Q96F07 1278 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 SNF8Q96H20 258 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 SCLT1Q96NL6 688 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 ACAP3Q96P50 834 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 CCDC77Q9BR77 488 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 TRIM51Q9BSJ1 452 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 PI4K2AQ9BTU6 479 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 MIS12Q9H081 205 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 NEUROG2Q9H2A3 272 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 LHX5Q9H2C1 402 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 RPF1Q9H9Y2 349 aaKnown RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 ERVK-5Q9HDB9 667 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 GRHL1Q9NZI5 618 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 WDR35Q9P2L0 1181 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 ANKFY1Q9P2R3 1169 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 RSPH14Q9UHP6 348 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 CPSF3Q9UKF6 684 aaKnown RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 KIAA1257Q9ULG3 409 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 ATXN7L1Q9ULK2 861 aaPredicted RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 EFR3BQ9Y2G0 817 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 ATP8A1Q9Y2Q0 1164 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 SNX24Q9Y343 169 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 RRP15Q9Y3B9 282 aaKnown RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 NR2E1Q9Y466 385 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 FNDC1Q4ZHG4 1894 aaPredicted RBP6.04□□□□□ -1.44
SDF2-206ENST00000587788 COL4A6Q14031 1691 aa6.04□□□□□ -1.44
SDF2-206ENST00000587788 RALGAPA2Q2PPJ7 1873 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 GMNCA6NCL1 334 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 KHNYNO15037 678 aaKnown RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 RGS16O15492 202 aaPredicted RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 TCEA3O75764 348 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 KIAA0754O94854 1291 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 TJP3O95049 919 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 PARNO95453 639 aaKnown RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 IQCF3P0C7M6 154 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 CKBP12277 381 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ATF2P15336 505 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 MARCKSL1P49006 195 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 YARSP54577 528 aaKnown RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 SNX16P57768 344 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 CCINQ13939 588 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 GRIN2CQ14957 1233 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ACAP1Q15027 740 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 SIX1Q15475 284 aaPredicted RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 DCAF4L1Q3SXM0 396 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 TMEM240Q5SV17 173 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ZNF618Q5T7W0 954 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 KCTD16Q68DU8 428 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 DNAJC24Q6P3W2 148 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 TTC27Q6P3X3 843 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 SLC27A1Q6PCB7 646 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ZNF365Q70YC5 407 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 CATSPER4Q7RTX7 472 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 POLNQ7Z5Q5 900 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ADAT2Q7Z6V5 191 aaKnown RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 YTHDF3Q7Z739 585 aaKnown RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 DEFB128Q7Z7B8 93 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 SRLQ86TD4 932 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 RELL1Q8IUW5 271 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 TMEM199Q8N511 208 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 OR5B17Q8NGF7 314 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 FBXO25Q8TCJ0 367 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ZNF606Q8WXB4 792 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 PPM1EQ8WY54 764 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 P3H4Q92791 437 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 ZBTB45Q96K62 511 aaPredicted RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 FRMD6Q96NE9 622 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 SERPINB12Q96P63 405 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 NCAPGQ9BPX3 1015 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 TRIM31Q9BZY9 425 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 DCLK3Q9C098 648 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 DNAI2Q9GZS0 605 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 HAPLN2Q9GZV7 340 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 FAM49AQ9H0Q0 323 aaPredicted RBP6.03□□□□□ -1.44
SDF2-206ENST00000587788 CENPHQ9H3R5 247 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 PLEKHA4Q9H4M7 779 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 PPCSQ9HAB8 311 aa6.03□□□□□ -1.44
SDF2-206ENST00000587788 CYP3A43Q9HB55 503 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 490.2 ms