RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TGFB1I1O43294 461 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 COCHO43405 550 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ATG13O75143 517 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 DKK1O94907 266 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 STAU1O95793 577 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 CFIP05156 583 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 CCDC130P13994 396 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TNNI1P19237 187 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 MAOBP27338 520 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 GNL1P36915 607 aaPredicted RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 DLG4P78352 724 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 DPYDQ12882 1025 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF268Q14587 947 aaPredicted RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 POSTNQ15063 836 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ELF2Q15723 593 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 NFE2Q16621 373 aaPredicted RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 WDR72Q3MJ13 1102 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 PMS2CLQ68D20 193 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 SPOPLQ6IQ16 392 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 DENND5BQ6ZUT9 1274 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 Q6ZVU0 165 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 PAQR9Q6ZVX9 377 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 BRAPQ7Z569 592 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 CACUL1Q86Y37 369 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TMEM25Q86YD3 366 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 BBS7Q8IWZ6 715 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 GPD1LQ8N335 351 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 PNPLA1Q8N8W4 532 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 C2orf15Q8WU43 125 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 CACTINQ8WUQ7 758 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 KCNN1Q92952 543 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TRMT2BQ96GJ1 504 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ANKRD36BP1Q96IX9 119 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 GTPBP2Q9BX10 602 aaKnown RBP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 SNX25Q9H3E2 840 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 SLC39A2Q9NP94 309 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 GMIPQ9P107 970 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 BCCIPQ9P287 314 aaKnown RBP eCLIP7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 CCDC39Q9UFE4 941 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 KLK13Q9UKR3 277 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ITGA11Q9UKX5 1188 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ARHGAP26Q9UNA1 814 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 MTMR6Q9Y217 621 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 PTPRDP23468 1912 aa7.28□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF233A6NK53 670 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 KHNYNO15037 678 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 RHOBTB1O94844 696 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 KAT7O95251 611 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TNNC2P02585 160 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 GAP43P17677 238 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 GARTP22102 1010 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 WARSP23381 471 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ANXA13P27216 316 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 PCSK1P29120 753 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 PNPLA4P41247 253 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 KIR2DL1P43626 348 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 AFMP43652 599 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 LHX1P48742 406 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 LIMK1P53667 647 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ASIC1P78348 528 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 CYP24A1Q07973 514 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 COL9A2Q14055 689 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 CRY1Q16526 586 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ANO4Q32M45 955 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 CFAP221Q4G0U5 840 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 USP39Q53GS9 565 aaKnown RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TMEM164Q5U3C3 297 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 EGFLAMQ63HQ2 1017 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 C1orf228Q6PIY5 440 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 UNQ6494/PRO21346Q6UXR6 183 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TPGS1Q6ZTW0 290 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TOGARAM2Q6ZUX3 1019 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 DPH6Q7L8W6 267 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 GPRIN1Q7Z2K8 1008 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 LIMS2Q7Z4I7 341 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ACOT1Q86TX2 421 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TMEM86AQ8N2M4 240 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 CAMKK1Q8N5S9 505 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 LRRC52Q8N7C0 313 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 C12orf29Q8N999 325 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 MYCBPAPQ8TBZ2 947 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 LEO1Q8WVC0 666 aaPredicted RBP7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 SCFD1Q8WVM8 642 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TSPAN18Q96SJ8 248 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 MED10Q9BTT4 135 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 SCNM1Q9BWG6 230 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 TMEM206Q9H813 350 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 KIF9Q9HAQ2 790 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 ARHGEF4Q9NR80 690 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 AGPAT3Q9NRZ7 376 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 FAM49BQ9NUQ9 324 aa7.27□□□□□ -1.25
PRPF40B-214ENST00000551320 OSER1Q9NX31 292 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms