RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 I3L4J1 428 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 BAG2O95816 211 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 ESRRAP11474 423 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 TFDP2Q14188 446 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 POLNQ7Z5Q5 900 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 FZD8Q9H461 694 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 ETNK2Q9NVF9 386 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 TXNDC16Q9P2K2 825 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 DRG1Q9Y295 367 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 C3orf70A6NLC5 250 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 B4GALT4O60513 344 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 CYP2F1P24903 491 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 PITX1P78337 314 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 LRRC36Q1X8D7 754 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 CCDC62Q6P9F0 684 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 KCNT2Q6UVM3 1135 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 RSPH3Q86UC2 560 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 TTC30AQ86WT1 665 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 PLD5Q8N7P1 536 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 PDCD7Q8N8D1 485 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 SRPK1Q96SB4 655 aaKnown RBP14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 TMEM120AQ9BXJ8 343 aa14.2□□□□□ -0.14
PRPF40B-209ENST00000548825 IGKV6D-21A0A0A0MT36 114 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 H3BRJ5 948 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 CAPN9O14815 690 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 DCTN3O75935 186 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 METTL18O95568 372 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 GSTA1P08263 222 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 VDRP11473 427 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 KCNA4P22459 653 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 PREPLQ4J6C6 727 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 HEATR6Q6AI08 1181 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 IL31Q6EBC2 164 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ERO1BQ86YB8 467 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 TP53INP2Q8IXH6 220 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 PCDH19Q8TAB3 1148 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC2A14Q8TDB8 520 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 CCDC124Q96CT7 223 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ZMAT2Q96NC0 199 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 VPS11Q9H270 941 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 CCDC134Q9H6E4 229 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ACSS3Q9H6R3 686 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 SMYD2Q9NRG4 433 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 TNFSF13BQ9Y275 285 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 C22orf31O95567 290 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 GOT1P17174 413 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ZNF143P52747 638 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 LRRC38Q5VT99 294 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 NUDCD3Q8IVD9 361 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ANKRD13AQ8IZ07 590 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 MOCOSQ96EN8 888 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 RNF157Q96PX1 679 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 VPS33BQ9H267 617 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 SNX25Q9H3E2 840 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 CYP4F11Q9HBI6 524 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 ARL8BQ9NVJ2 186 aa14.19□□□□□ -0.14
PRPF40B-209ENST00000548825 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 MEI4A8MW99 385 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ATP9BO43861 1147 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 CTSHP09668 335 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ISLR2Q6UXK2 745 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 GPC2Q8N158 579 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 SOCS7O14512 581 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ABLIM1O14639 778 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 IL18RAPO95256 599 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 RPL10AP62906 217 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 DNAAF3Q8N9W5 541 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 USP33Q8TEY7 942 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 RNF34Q969K3 372 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 CLPTM1LQ96KA5 538 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 WDR35Q9P2L0 1181 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 PACSIN3Q9UKS6 424 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 PCDHGC3Q9UN70 934 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 NUMBLQ9Y6R0 609 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 LOC100653049A0A140TA62 436 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 TCRBV5S1A1TA0A578 114 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ARHGAP42A6NI28 874 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 PAPSS1O43252 624 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 LYPLA1O75608 230 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 KRT34O76011 436 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 KRT37O76014 449 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 IGFBP6P24592 240 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 ATXN3P54252 364 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 GRIK4Q16099 956 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 CCDC185Q8N715 623 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 HASPINQ8TF76 798 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 DNAJB3Q8WWF6 145 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 FAM161BQ96MY7 647 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 CNTN6Q9UQ52 1028 aa14.18□□□□□ -0.14
PRPF40B-209ENST00000548825 COL11A1P12107 1806 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms