RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CELF3Q5SZQ8 465 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 STXBP5Q5T5C0 1151 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LGSNQ5TDP6 509 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ATG16L1Q676U5 607 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 JADE1Q6IE81 842 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 IRGCQ6NXR0 463 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 FAM183BPQ6ZVS7 135 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ARCQ7LC44 396 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ZC3H18Q86VM9 953 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 TMEM192Q8IY95 271 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ARHGAP24Q8N264 748 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LRRC71Q8N4P6 559 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH12-203ENST00000517378 RXFP2Q8WXD0 754 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 TTC17Q96AE7 1141 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 SPDL1Q96EA4 605 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PDGFDQ9GZP0 370 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 NMUR2Q9GZQ4 415 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ETNK2Q9NVF9 386 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PRMT7Q9NVM4 692 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 BTBD7Q9P203 1132 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ZC3H7BQ9UGR2 993 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 BARX2Q9UMQ3 279 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 PLA2G4CQ9UP65 541 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LRCH1Q9Y2L9 728 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CCDC189A1A4V9 331 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LACTBL1A8MY62 500 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CXorf49A8MYA2 514 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 I3L4J1 428 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 GPR25O00155 361 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 SOCS7O14512 581 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PRPSAP2O60256 369 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 AVILO75366 819 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 GCATO75600 419 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ARIH2O95376 493 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PSMG1O95456 288 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ITGB3P05106 788 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 KRT19P08727 400 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CNTFP26441 200 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CRHR1P34998 444 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 SLC34A1Q06495 639 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 KPNB1Q14974 876 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 RCN1Q15293 331 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CCDC14Q49A88 953 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 BOLA3Q53S33 107 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 SH3PXD2AQ5TCZ1 1133 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 CES4AQ5XG92 561 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 OLFML1Q6UWY5 402 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 APBB1IPQ7Z5R6 666 aaPredicted RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 GSDMBQ8TAX9 411 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 NRG4Q8WWG1 115 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 FGD4Q96M96 766 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 IQCGQ9H095 443 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 WWP1Q9H0M0 922 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 C1orf21Q9H246 121 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 PCDH18Q9HCL0 1135 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ALG13Q9NP73 1137 aaKnown RBP6.92□□□□□ -1.3
CDH12-203ENST00000517378 SMYD2Q9NRG4 433 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ZNF212Q9UDV6 495 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
CDH12-203ENST00000517378 FAM237BA0A1B0GVD1 139 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HMX2A2RU54 273 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 H7C0C1 242 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KCNN4O15554 427 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KRT36O76013 467 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KRT38O76015 456 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NPTXRO95502 500 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 IQCF3P0C7M6 154 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 STAG3L1P0CL83 205 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SETSIPP0DME0 302 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ESRRAP11474 423 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 PDGFRAP16234 1089 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ATP5OP48047 213 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SERPINB9P50453 376 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 IRX1P78414 480 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 AP1B1Q10567 949 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 BST1Q10588 318 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 MTM1Q13496 603 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HSDL1Q3SXM5 330 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 RAB6CQ53S08 254 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SNX30Q5VWJ9 437 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 MAP1SQ66K74 1059 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 STEAP4Q687X5 459 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 UNC5AQ6ZN44 842 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 LRRC74BQ6ZQY2 392 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TTC7BQ86TV6 843 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TRIM50Q86XT4 487 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TMPRSS6Q8IU80 811 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CDKL3Q8IVW4 592 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 LINC01465Q8N7H1 131 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PCDH19Q8TAB3 1148 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 WDR60Q8WVS4 1066 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 MCUR1Q96AQ8 359 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms