RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 NAP1L1P55209 391 aaKnown RBP5.11□□□□□ -1.59
VPS13A-211ENST00000484581 SMAD1Q15797 465 aaKnown RBP5.11□□□□□ -1.59
VPS13A-211ENST00000484581 RRAGAQ7L523 313 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 ZNF627Q7L945 461 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 USP38Q8NB14 1042 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 C1orf131Q8NDD1 294 aaKnown RBP5.11□□□□□ -1.59
VPS13A-211ENST00000484581 POC1BQ8TC44 478 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 CSGALNACT1Q8TDX6 532 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 ADAMTS18Q8TE60 1221 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 WDR60Q8WVS4 1066 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 CPT1BQ92523 772 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 GOLGA1Q92805 767 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 HVCN1Q96D96 273 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 C7orf26Q96N11 449 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 CPPED1Q9BRF8 314 aaPredicted RBP5.11□□□□□ -1.59
VPS13A-211ENST00000484581 NUDT22Q9BRQ3 303 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 TTPALQ9BTX7 342 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 GPR63Q9BZJ6 419 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 TRIM5Q9C035 493 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 VPS16Q9H269 839 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 WDR26Q9H7D7 661 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 UNKLQ9H9P5 680 aaKnown RBP5.11□□□□□ -1.59
VPS13A-211ENST00000484581 PLEKHA5Q9HAU0 1116 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 SPON1Q9HCB6 807 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 DNAJB11Q9UBS4 358 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 DERAQ9Y315 318 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 RAD54BQ9Y620 910 aa5.11□□□□□ -1.59
VPS13A-211ENST00000484581 PNMA6EA0A0J9YXQ4 647 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 E7ENX8 843 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 RGS10O43665 173 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 PPP6R2O75170 966 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 IPO13O94829 963 aaKnown RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 HNRNPA1P09651 372 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 RPS6KB1P23443 525 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ZEB1P37275 1124 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 MAN2A2P49641 1150 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 SCNN1GP51170 649 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 CHN2P52757 468 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 CLNS1AP54105 237 aaKnown RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 TAP2Q03519 686 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 MYO1EQ12965 1108 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 GRM4Q14833 912 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ANKRD1Q15327 319 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 CCDC30Q5VVM6 783 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ITPRIPL1Q6GPH6 555 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 TAF2Q6P1X5 1199 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 TTC30AQ86WT1 665 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 SPARTQ8N0X7 666 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 MBD3L2Q8NHZ7 208 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ADAMTS15Q8TE58 950 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ABHD5Q8WTS1 349 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 PNKPQ96T60 521 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 REXO4Q9GZR2 422 aaKnown RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 FSCN3Q9NQT6 498 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 AASSQ9UDR5 926 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 TBX20Q9UMR3 447 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 ARHGAP26Q9UNA1 814 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 CNTN6Q9UQ52 1028 aa5.1□□□□□ -1.59
VPS13A-211ENST00000484581 RRP7AQ9Y3A4 280 aaKnown RBP5.1□□□□□ -1.59
VPS13A-211ENST00000484581 E7EVH7 732 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 TSPAN3O60637 253 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 TMEM63AO94886 807 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 SERPINA4P29622 427 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 PPIFP30405 207 aaKnown RBP5.09□□□□□ -1.59
VPS13A-211ENST00000484581 PRKAG1P54619 331 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 NUCB1Q02818 461 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 CSHL1Q14406 222 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 RPS6KA2Q15349 733 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 DCAF17Q5H9S7 520 aaPredicted RBP5.09□□□□□ -1.59
VPS13A-211ENST00000484581 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 AGAP9Q5VTM2 703 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ATG16L1Q676U5 607 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 LAIR1Q6GTX8 287 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ACAD10Q6JQN1 1059 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 NGDNQ8NEJ9 315 aaKnown RBP5.09□□□□□ -1.59
VPS13A-211ENST00000484581 MDGA1Q8NFP4 955 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 DNAJB14Q8TBM8 379 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ST8SIA2Q92186 375 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ZUFSPQ96AP4 578 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 WDR24Q96S15 920 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 AGAP2Q99490 1192 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 BARD1Q99728 777 aaKnown RBP5.09□□□□□ -1.59
VPS13A-211ENST00000484581 REEP2Q9BRK0 252 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 PTDSS2Q9BVG9 487 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 PAIP1Q9H074 479 aaKnown RBP5.09□□□□□ -1.59
VPS13A-211ENST00000484581 BRD8Q9H0E9 1235 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 CXorf36Q9H7Y0 433 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 NRDE2Q9H7Z3 1164 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 CHODLQ9H9P2 273 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 POGKQ9P215 609 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 CTTNBP2NLQ9P2B4 639 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 NEU2Q9Y3R4 380 aa5.09□□□□□ -1.59
VPS13A-211ENST00000484581 ZSCAN9O15535 394 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-211ENST00000484581 MFAP3LO75121 409 aa5.08□□□□□ -1.6
VPS13A-211ENST00000484581 ZBED4O75132 1171 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms