RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 SIRPGQ9P1W8 387 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ZC3H7BQ9UGR2 993 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 BUD23O43709 281 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 GRAP2O75791 330 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 SNRPAP09012 282 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 GSTA2P09210 222 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 STIP1P31948 543 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 TRPC3Q13507 836 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 RALGPS1Q5JS13 557 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ANGEL2Q5VTE6 544 aaKnown RBP12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 RNF217Q8TC41 542 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 MTBPQ96DY7 904 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 ZNF778Q96MU6 729 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 XYLT2Q9H1B5 865 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
PDZRN3-203ENST00000462146 KLHL33A6NCF5 533 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 F8W8V4 182 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 ITM2AO43736 263 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 CIB2O75838 187 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 ETS2P15036 469 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 TSHRP16473 764 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 RBL1P28749 1068 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 BAG6P46379 1132 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 ATG14Q6ZNE5 492 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 ZFAND2BQ8WV99 257 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 APOL6Q9BWW8 343 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 FRMD8P1Q9BZ68 369 aaPredicted RBP12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 WWP1Q9H0M0 922 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 FZD1Q9UP38 647 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 HEY1Q9Y5J3 304 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 A0A088AWK7 358 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 F5H423 210 aaPredicted RBP12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 WNT10BO00744 389 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 APRTP07741 180 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 KRT19P08727 400 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 CPOXP36551 454 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 GMPRP36959 345 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 YWHAEP62258 255 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 AP2B1P63010 937 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 PEX6Q13608 980 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 LPCAT4Q643R3 524 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
PDZRN3-203ENST00000462146 CHADO15335 359 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SNNO75324 88 aaPredicted RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 KRT37O76014 449 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 PDE5AO76074 875 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 RTN3O95197 1032 aaPredicted RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 EGFRP00533 1210 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 HOXC6P09630 235 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 CRABP2P29373 138 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 GSTT1P30711 240 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 CNPY1Q3B7I2 92 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 FAM102AQ5T9C2 384 aaPredicted RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 UNC5AQ6ZN44 842 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 CRLF3Q8IUI8 442 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 PNPLA8Q9NP80 782 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 ADCY3O60266 1144 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 MSCO60682 206 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 PEX10O60683 326 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 TOM1L1O75674 476 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 RNF8O76064 485 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SRGAP2CP0DJJ0 459 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 OSBPP22059 807 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 CCNFP41002 786 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 GRIA1P42261 906 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 GSTA3Q16772 222 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SFT2D3Q587I9 215 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 DENND5BQ6ZUT9 1274 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 HIPK4Q8NE63 616 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 UBA3Q8TBC4 463 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 FNIP1Q8TF40 1166 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 PDP2Q9P2J9 529 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 MAFBQ9Y5Q3 323 aaPredicted RBP12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 ARHGAP42A6NI28 874 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SDR42E2A6NKP2 422 aa12.17□□□□□ -0.46
PDZRN3-203ENST00000462146 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms