RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TNFRSF6BO95407 300 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 ITGA2BP08514 1039 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 PDHA1P08559 390 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 SRGAP2BP0DMP2 458 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 RENBPP51606 427 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 TIRAPP58753 221 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 DGCR2P98153 550 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 BIRC3Q13489 604 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 PRKG1Q13976 671 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 CLCA4Q14CN2 919 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 PTPRRQ15256 657 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 LSM12Q3MHD2 195 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 ZNF618Q5T7W0 954 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 SLC9A4Q6AI14 798 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 TANGO2Q6ICL3 276 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 MAVSQ7Z434 540 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 SOCS4Q8WXH5 440 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 GLG1Q92896 1179 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 Q96MF0 132 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 AIFM2Q9BRQ8 373 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 TP63Q9H3D4 680 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 TRIM36Q9NQ86 728 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 KLC4Q9NSK0 619 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 HERC5Q9UII4 1024 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 DRG1Q9Y295 367 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 REXO2Q9Y3B8 237 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 PCDHGB3Q9Y5G1 929 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 DNMT1P26358 1616 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 EPRSP07814 1512 aaKnown RBP5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 HMGXB3Q12766 1538 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 UHRF1BP1LA0JNW5 1464 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 MBD5Q9P267 1494 aa5.07□□□□□ -1.6
HMGB1P16-201ENST00000447155 LRRIQ1Q96JM4 1722 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 COL15A1P39059 1388 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 IBTKQ9P2D0 1353 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 A1L4Q6 167 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 AGPSO00116 658 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 PEX1O43933 1283 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 NXPH3O95157 252 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 ONECUT2O95948 504 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 FGAP02671 866 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RHOP08100 348 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 HSD3B1P14060 373 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 CD19P15391 556 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 NTSR1P30989 418 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 ALDH18A1P54886 795 aaKnown RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 EIF2B5Q13144 721 aaKnown RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 PTPAQ15257 358 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 TBCCQ15814 346 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 LY6KQ17RY6 165 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 NBPF8Q3BBV2 869 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RFX8Q6ZV50 586 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 PRRT2Q7Z6L0 340 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 TTC30AQ86WT1 665 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RAB11FIP4Q86YS3 637 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 STT3BQ8TCJ2 826 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RSC1A1Q92681 617 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 TBC1D20Q96BZ9 403 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RSPRY1Q96DX4 576 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 FBXL20Q96IG2 436 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 NUDT22Q9BRQ3 303 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 MLST8Q9BVC4 326 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 SORBS1Q9BX66 1292 aaKnown RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 GRPEL1Q9HAV7 217 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 EHD3Q9NZN3 535 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 RIMKLBQ9ULI2 386 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 SCAF8Q9UPN6 1271 aaKnown RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 SLC27A6Q9Y2P4 619 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 SAMD9Q5K651 1589 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 REREQ9P2R6 1566 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 POLA1P09884 1462 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 CAMSAP2Q08AD1 1489 aa5.06□□□□□ -1.6
HMGB1P16-201ENST00000447155 MTUS2Q5JR59 1369 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 NESP48681 1621 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 KIF7Q2M1P5 1343 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 CCDC189A1A4V9 331 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 WDR27A2RRH5 827 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 MPPED1O15442 326 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 ZSCAN9O15535 394 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 USP1O94782 785 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 ERBB2P04626 1255 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 ANXA6P08133 673 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 DHRS4L1P0CG22 281 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 HTR7P34969 479 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 LIPAP38571 399 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 FOLR3P41439 243 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 DMTNQ08495 405 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 PPFIA1Q13136 1202 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 FHL3Q13643 280 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 BMPR2Q13873 1038 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 POSTNQ15063 836 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 RALBP1Q15311 655 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 FNDC7Q5VTL7 733 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 KIAA0895LQ68EN5 471 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 SPRED1Q7Z699 444 aa5.05□□□□□ -1.6
HMGB1P16-201ENST00000447155 CAND1Q86VP6 1230 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms