RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 XPO1O14980 1071 aaKnown RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SPTLC1O15269 473 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 PRPF4O43172 522 aaKnown RBP eCLIP10.85□□□□□ -0.672e-8■□□□□ 11.3
CPNE1-218ENST00000439806 SNX3O60493 162 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 KPNA6O60684 536 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 DAB1O75553 588 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SPAG6O75602 509 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 GABBR2O75899 941 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 CA4P22748 312 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 RBL1P28749 1068 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 ZNF157P51786 506 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 HDAC4P56524 1084 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 YWHAGP61981 247 aaKnown RBP eCLIP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SOX4Q06945 474 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 MPP2Q14168 576 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 KCNJ11Q14654 390 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 EFTUD2Q15029 972 aaKnown RBP eCLIP10.85□□□□□ -0.674e-8■■■■■ 37.6
CPNE1-218ENST00000439806 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SEPT7Q16181 437 aaKnown RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 MSS51Q4VC12 460 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 HHATQ5VTY9 493 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SLC9A4Q6AI14 798 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 C4orf22Q6V702 233 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 C3orf62Q6ZUJ4 267 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 ARCQ7LC44 396 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 PQLC3Q8N755 202 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SMG8Q8ND04 991 aaKnown RBP10.85□□□□□ -0.67
CPNE1-218ENST00000439806 PCDH19Q8TAB3 1148 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 SLC2A14Q8TDB8 520 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 CLEC4CQ8WTT0 213 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 CCT6BQ92526 530 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 KHSRPQ92945 711 aaKnown RBP eCLIP10.85□□□□□ -0.678e-8■■■□□ 15.7
CPNE1-218ENST00000439806 PAFAH2Q99487 392 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 OSBPL7Q9BZF2 842 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 ACSS3Q9H6R3 686 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 NRDE2Q9H7Z3 1164 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 GOLGA2P5Q9HBQ8 144 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 RAB6BQ9NRW1 208 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 GJD2Q9UKL4 321 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 AP4E1Q9UPM8 1137 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 TRPV2Q9Y5S1 764 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 IKBKGQ9Y6K9 419 aa10.85□□□□□ -0.67
CPNE1-218ENST00000439806 CYB561D2O14569 222 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 TOMM70O94826 608 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 GSTA1P08263 222 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 AKR1A1P14550 325 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 LMO2P25791 158 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 LRPAP1P30533 357 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 ARL4AP40617 200 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 ELK3P41970 407 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 RPL34P49207 117 aaKnown RBP10.84□□□□□ -0.67
CPNE1-218ENST00000439806 SLC18A1P54219 525 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 MRPS6P82932 125 aaKnown RBP10.84□□□□□ -0.67
CPNE1-218ENST00000439806 XRCC4Q13426 336 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 DPYSL2Q16555 572 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 TAF2Q6P1X5 1199 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 STRADAQ7RTN6 431 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 SPATA21Q7Z572 469 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 RSPH3Q86UC2 560 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 PACS2Q86VP3 889 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 FAM228AQ86W67 206 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 C4orf33Q8N1A6 199 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 B3GALNT2Q8NCR0 500 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 FAM149B1Q96BN6 582 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 GRAMD1AQ96CP6 724 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 RTP4Q96DX8 246 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 CFAP36Q96G28 342 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-218ENST00000439806 HNRNPABQ99729 332 aaKnown RBP10.84□□□□□ -0.67
CPNE1-218ENST00000439806 LRRC4Q9HBW1 653 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 SSU72Q9NP77 194 aaKnown RBP10.84□□□□□ -0.67
CPNE1-218ENST00000439806 SLC38A7Q9NVC3 462 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 ETNK2Q9NVF9 386 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
CPNE1-218ENST00000439806 IQANK1A0A1B0GTG1 560 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 H3BRJ5 948 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 DNAJC8O75937 253 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ZWINTO95229 277 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 OAS1P00973 400 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 C6orf222P0C671 652 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 PTPN1P18031 435 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 TFE3P19532 575 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 IL4RP24394 825 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 TKTP29401 623 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 L1CAMP32004 1257 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 SCTRP47872 440 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 NRLP54845 237 aa10.83□□□□□ -0.68
CPNE1-218ENST00000439806 YWHAZP63104 245 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 PURAQ00577 322 aaKnown RBP10.83□□□□□ -0.68
CPNE1-218ENST00000439806 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms