RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 F7P08709 466 aaPredicted RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 CD1EP15812 388 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 DESP17661 470 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ALDH1A3P47895 512 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 MTERF2Q49AM1 385 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 CASC4Q6P4E1 433 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 B3GNT6Q6ZMB0 384 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 SDCCAG8Q86SQ7 713 aaPredicted RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 PHTF2Q8N3S3 785 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 MRPL1Q9BYD6 325 aaKnown RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 DDX56Q9NY93 547 aaKnown RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 SDR42E2A6NKP2 422 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 E7ESA3 106 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 RFPL1O75677 317 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TFAP2AP05549 437 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 RGS2P41220 211 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ADARP55265 1226 aaKnown RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 DGKZQ13574 1117 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 PIGHQ14442 188 aaPredicted RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 RAB6CQ53S08 254 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 UGT2A3Q6UWM9 527 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 FRMD7Q6ZUT3 714 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ZFP28Q8NHY6 868 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 VCPIP1Q96JH7 1222 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 IMPG2Q9BZV3 1241 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 RAB6CQ9H0N0 254 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 USP29Q9HBJ7 922 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 CALB1P05937 261 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 MRPS22P82650 360 aaKnown RBP17.24■□□□□ 0.35
PKP4-204ENST00000421462 HPCAP84074 193 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ROR1Q01973 937 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 PDK1Q15118 436 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 DBN1Q16643 649 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TEX44Q53QW1 395 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 C6orf52Q5T4I8 152 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 LGSNQ5TDP6 509 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ZBTB33Q86T24 672 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 ARFGAP1Q8N6T3 406 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TMEM35BQ8NCS4 154 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 PGBD4Q96DM1 585 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 TCHPQ9BT92 498 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 POLIQ9UNA4 740 aa17.24■□□□□ 0.35
PKP4-204ENST00000421462 A0A1B0GTW7 788 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 SMIM31A0A1B0GVY4 71 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 GRAP2O75791 330 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 BPGMP07738 259 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 TCN1P20061 433 aaPredicted RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 FDFT1P37268 417 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 CRADDP78560 199 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 HNRNPDQ14103 355 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 HADHQ16836 314 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 SH3PXD2AQ5TCZ1 1133 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 ATXN7L3BQ96GX2 97 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 TARS2Q9BW92 718 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 NXF1Q9UBU9 619 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 FETUBQ9UGM5 382 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 MYLK3Q32MK0 819 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 CRY2Q49AN0 593 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 SH2D4BQ5SQS7 431 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 KYAT3Q6YP21 454 aaKnown RBP17.23■□□□□ 0.35
PKP4-204ENST00000421462 TFAP2BQ92481 460 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 ZNF778Q96MU6 729 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 ZDHHC15Q96MV8 337 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 TTLL3Q9Y4R7 772 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
PKP4-204ENST00000421462 CNTNAP2Q9UHC6 1331 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 GOLGA8QA0A0J9YX86 632 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 GOLGA8OA6NCC3 632 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 C3orf70A6NLC5 250 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 TTLL13PA6NNM8 815 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 GOLGA8NF8WBI6 632 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 H3BSA7 217 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
PKP4-204ENST00000421462 SRGAP2CP0DJJ0 459 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SMIM18P0DKX4 95 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 MAGEA10P43363 369 aaPredicted RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 RPL5P46777 297 aaKnown RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 CDH6P55285 790 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 YWHAZP63104 245 aaKnown RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 SCYL2Q6P3W7 929 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 AAGABQ6PD74 315 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 TAS1R3Q7RTX0 852 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 TTC13Q8NBP0 860 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 PIWIL2Q8TC59 973 aaKnown RBP17.22■□□□□ 0.35
PKP4-204ENST00000421462 DEPDC1BQ8WUY9 529 aa17.22■□□□□ 0.35
PKP4-204ENST00000421462 MOCOSQ96EN8 888 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms