RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 PLK2Q9NYY3 685 aa12.12□□□□□ -0.47
SMARCA1-201ENST00000371121 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 TXNDC9O14530 226 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MMP8P22894 467 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MSX2P35548 267 aaPredicted RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 CD151P48509 253 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 IDH3AP50213 366 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 DYNLT1P63172 113 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 CLDN10P78369 228 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MS4A2Q01362 244 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 LPIN1Q14693 890 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 SMTNL2Q2TAL5 461 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 KCNT1Q5JUK3 1230 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 POLNQ7Z5Q5 900 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MIPOL1Q8TD10 442 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC38A7Q9NVC3 462 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 EFR3BQ9Y2G0 817 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ARHGAP42A6NI28 874 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 NDUFB10O96000 172 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 CAND1Q86VP6 1230 aaKnown RBP12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 PNPLA8Q9NP80 782 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC17A6Q9P2U8 582 aa12.11□□□□□ -0.47
SMARCA1-201ENST00000371121 RXRGP48443 463 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 TRMT10BQ6PF06 316 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CHERPQ8IWX8 916 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 KLHL32Q96NJ5 620 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 APOL6Q9BWW8 343 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ITGA11Q9UKX5 1188 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 DTNAQ9Y4J8 743 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 DDX39AO00148 427 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 GAS7O60861 476 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PORP16435 677 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF26P17031 533 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ADORA2AP29274 412 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 EPHA3P29320 983 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 NDST2P52849 883 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CACNB3P54284 484 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 YWHAZP63104 245 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CYLC2Q14093 348 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PPP6R3Q5H9R7 873 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 TMEM102Q8N9M5 508 aaPredicted RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 FAM71DQ8N9W8 422 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ICA1LQ8NDH6 482 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 TANKQ92844 425 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PPP1R14BQ96C90 147 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF341Q9BYN7 854 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 H0YIN7 160 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PLOD2O00469 737 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF24P17028 368 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PRKCHP24723 683 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PHBP35232 272 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PSMD7P51665 324 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 PEX3P56589 373 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 GRAMD1BQ3KR37 738 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 RSPH3Q86UC2 560 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 ACO2Q99798 780 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 CCT7Q99832 543 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 XAB2Q9HCS7 855 aaKnown RBP12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
SMARCA1-201ENST00000371121 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms