RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 C11orf84Q9BUA3 381 aaPredicted RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 ACBD3Q9H3P7 528 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 ALG13Q9NP73 1137 aaKnown RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 H7C4K7 107 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 FSCN2O14926 492 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 TBC1D4O60343 1298 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 TCF4P15884 667 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 PTPN7P35236 360 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 BMPR1AP36894 532 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 CETN2P41208 172 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 MATKP42679 507 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 YWHAZP63104 245 aaKnown RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 VSTM1Q6UX27 236 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 CENPIQ92674 756 aaPredicted RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 CLP1Q92989 425 aaKnown RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 IGSF21Q96ID5 467 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 CFAP57Q96MR6 1250 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 DDX23Q9BUQ8 820 aaKnown RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 PRRC2BQ5JSZ5 2229 aaKnown RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 PATJQ8NI35 1801 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 DAB1O75553 588 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 RHOXF2BP0C7M4 288 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 MIPP30301 263 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 MAGEA11P43364 429 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 DAOAP59103 153 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 CCDC85BQ15834 202 aaPredicted RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 USP41Q3LFD5 358 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 RTP2Q5QGT7 225 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 PM20D1Q6GTS8 502 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 BCL7CQ8WUZ0 217 aaPredicted RBP12.6□□□□□ -0.39
USF1-203ENST00000368021 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 NT5C3BQ969T7 300 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 RHOXF2Q9BQY4 288 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 AP1M1Q9BXS5 423 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.6□□□□□ -0.39
USF1-203ENST00000368021 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 USP3Q9Y6I4 520 aa12.6□□□□□ -0.39
USF1-203ENST00000368021 KLHL33A6NCF5 533 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 LPXNO60711 386 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
USF1-203ENST00000368021 ZBED1O96006 694 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 LAG3P18627 525 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 MCM3P25205 808 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 IL1R2P27930 398 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 NDUFV1P49821 464 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 GPR17Q13304 367 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 GPM6BQ13491 265 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 SMC1AQ14683 1233 aaKnown RBP12.59□□□□□ -0.39
USF1-203ENST00000368021 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 C15orf59Q2T9L4 293 aaPredicted RBP12.59□□□□□ -0.39
USF1-203ENST00000368021 TXNRD3NBQ6F5E7 133 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 STRADAQ7RTN6 431 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 GPRIN1Q7Z2K8 1008 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 CMASQ8NFW8 434 aaPredicted RBP12.59□□□□□ -0.39
USF1-203ENST00000368021 C2orf15Q8WU43 125 aaKnown RBP12.59□□□□□ -0.39
USF1-203ENST00000368021 FAM172AQ8WUF8 416 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 FAM149B1Q96BN6 582 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 SLC2A13Q96QE2 648 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 TBCBQ99426 244 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 KRT12Q99456 494 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 OSBPL8Q9BZF1 889 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 ULBP1Q9BZM6 244 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 CHST7Q9NS84 486 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
USF1-203ENST00000368021 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 PCDHB5Q9Y5E4 795 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 PCDHB12Q9Y5F1 795 aa12.59□□□□□ -0.39
USF1-203ENST00000368021 TRIM66O15016 1216 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 PRPSAP2O60256 369 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 KRT1P04264 644 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 OR4Q2P0C623 313 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CYP2F1P24903 491 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 NOS2P35228 1153 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 GJC1P36383 396 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 CLCN6P51797 869 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 KLF1Q13351 362 aaPredicted RBP12.58□□□□□ -0.4
USF1-203ENST00000368021 SLC25A52Q3SY17 297 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ATP13A4Q4VNC1 1196 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 BOLA3Q53S33 107 aa12.58□□□□□ -0.4
USF1-203ENST00000368021 ODF2Q5BJF6 829 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms