RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 BRD9Q9H8M2 597 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 QTRT2Q9H974 415 aaKnown RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 TRIM39Q9HCM9 518 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 GGA3Q9NZ52 723 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 EBF1Q9UH73 591 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 TESMINQ9Y4I5 508 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 CAMSAP1Q5T5Y3 1602 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 ADAM11O75078 769 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 KATNA1O75449 491 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 PGK2P07205 417 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 MCF2P10911 925 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 GAP43P17677 238 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 GALNT3Q14435 633 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 MAPRE1Q15691 268 aaKnown RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 GTF2IRD2BQ6EKJ0 949 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 GTF2IRD2Q86UP8 949 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 STK32CQ86UX6 486 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 ADCY4Q8NFM4 1077 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 LRRC20Q8TCA0 184 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 SLC9A6Q92581 669 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 TOE1Q96GM8 510 aaKnown RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 B3GALT6Q96L58 329 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 ZNF560Q96MR9 790 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 EFHD1Q9BUP0 239 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 FAM105AQ9NUU6 356 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 PPP1R14DQ9NXH3 145 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 SENP1Q9P0U3 644 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 SNX7Q9UNH6 387 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 PFASO15067 1338 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 MEI4A8MW99 385 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 H0Y858 1186 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.99
TDP1-201ENST00000335725 CALB1P05937 261 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 CREB1P16220 341 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 MAGEA11P43364 429 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 NPTX2P47972 431 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 LRIT3Q3SXY7 679 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 MRPL10Q7Z7H8 261 aaKnown RBP8.9□□□□□ -0.99
TDP1-201ENST00000335725 AACSQ86V21 672 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 GIMAP8Q8ND71 665 aaPredicted RBP8.9□□□□□ -0.99
TDP1-201ENST00000335725 SLC44A1Q8WWI5 657 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 HDAC2Q92769 488 aaKnown RBP8.9□□□□□ -0.99
TDP1-201ENST00000335725 TMIGD2Q96BF3 282 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 CITED4Q96RK1 184 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 CYP4F12Q9HCS2 524 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 SDHAF3Q9NRP4 125 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 SNX24Q9Y343 169 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 TRAF6Q9Y4K3 522 aa8.9□□□□□ -0.99
TDP1-201ENST00000335725 ARHGAP42A6NI28 874 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PRSS44E7EML9 344 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PI4K2BG5E9Z4 385 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ST8SIA5O15466 376 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SEMA3DO95025 777 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 BCL10O95999 233 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 NTRK1P04629 796 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ITGA2P17301 1181 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 KLRC1P26715 233 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 NMT1P30419 496 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 TALDO1P37837 337 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ZAP70P43403 619 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ADCY7P51828 1080 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SLC12A2P55011 1212 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 CSTF3Q12996 717 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 RRP1BQ14684 758 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 ABCB5Q2M3G0 1257 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 DALRD3Q5D0E6 543 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 ANKRD26P1Q6NSI1 321 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 UGT3A1Q6NUS8 523 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PRR23BQ6ZRT6 265 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 OTOAQ7RTW8 1153 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 FAM124AQ86V42 546 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 CAMK1DQ8IU85 385 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 METTL13Q8N6R0 699 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 FIG4Q92562 907 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PIK3R3Q92569 461 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TP53INP1Q96A56 240 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 DOK1Q99704 481 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 OR51B5Q9H339 312 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 DPP7Q9UHL4 492 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 HDAC9Q9UKV0 1011 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 CACNG2Q9Y698 323 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 PTPRUQ92729 1446 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ABCB11O95342 1321 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 KIAA0391O15091 583 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 DNAJB5O75953 348 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 NADKO95544 446 aaPredicted RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 RPN1P04843 607 aaKnown RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 RAG1P15918 1043 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 RBL1P28749 1068 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 HSD17B7P56937 341 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 KRT17Q04695 432 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 BNIP3Q12983 259 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 SNTA1Q13424 505 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 HERC3Q15034 1050 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 TAF5Q15542 800 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 ASTE1Q2TB18 679 aaPredicted RBP8.89□□□□□ -0.99
TDP1-201ENST00000335725 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 KRT80Q6KB66 452 aa8.89□□□□□ -0.99
TDP1-201ENST00000335725 GALNT18Q6P9A2 607 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms