RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RFWD3Q6PCD5 774 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 PCDH19Q8TAB3 1148 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 PRR11Q96HE9 360 aaPredicted RBP15.84■□□□□ 0.13
DDX56-201ENST00000258772 CPB2Q96IY4 423 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 IQCGQ9H095 443 aaKnown RBP15.84■□□□□ 0.13
DDX56-201ENST00000258772 PDZD7Q9H5P4 517 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 DCLRE1BQ9H816 532 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 PLAC1Q9HBJ0 212 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 GPRC5DQ9NZD1 345 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 ZNF180Q9UJW8 692 aa15.84■□□□□ 0.13
DDX56-201ENST00000258772 UTRNP46939 3433 aa15.83■□□□□ 0.13
DDX56-201ENST00000258772 A0A087WZ62 844 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 ZBED1O96006 694 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 MYL2P10916 166 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 OSBPP22059 807 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 PRKCHP24723 683 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 CDC25CP30307 473 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 RGS7P49802 495 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 IGBP1P78318 339 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 SLC9A4Q6AI14 798 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 DLK2Q6UY11 383 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 C12orf29Q8N999 325 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 FDXACB1Q9BRP7 624 aaPredicted RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 NT5C1AQ9BXI3 368 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 KLC2Q9H0B6 622 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 PCDH18Q9HCL0 1135 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 PLLPQ9Y342 182 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 CITO14578 2027 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 C2orf71A6NGG8 1288 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 MAP3K6O95382 1288 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 LMNAP02545 664 aaKnown RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 APRTP07741 180 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 TXNP10599 105 aaKnown RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 MAGEA6P43360 314 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 RBP5P82980 135 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 KRT72Q14CN4 511 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 KHDC1Q4VXA5 237 aaKnown RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 LGSNQ5TDP6 509 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 TEKT4Q8WW24 435 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 OXNAD1Q96HP4 312 aaPredicted RBP15.83■□□□□ 0.12
DDX56-201ENST00000258772 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
DDX56-201ENST00000258772 FAM237BA0A1B0GVD1 139 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 DPYSL4O14531 572 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 GYG2O15488 501 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 SLC25A27O95847 323 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 ARF4P18085 180 aaPredicted RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 PTDSS1P48651 473 aaKnown RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 CA9Q16790 459 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 PMF1Q6P1K2 205 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 DSTYKQ6XUX3 929 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■■■ 92.8
DDX56-201ENST00000258772 FAM172AQ8WUF8 416 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 USP6NLQ92738 828 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 SMYD2Q9NRG4 433 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 ITGA11Q9UKX5 1188 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 SLC15A5A6NIM6 579 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 RFPL1O75677 317 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 LUC7L3O95232 432 aaKnown RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 APOEP02649 317 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 INSRRP14616 1297 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 MRPS5P82675 430 aaKnown RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 Q3C1V9 767 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 OLFML1Q6UWY5 402 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 TTC7BQ86TV6 843 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.82■□□□□ 0.12
DDX56-201ENST00000258772 MCUQ8NE86 351 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 CCDC110Q8TBZ0 833 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 LRRN4Q8WUT4 740 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 KHSRPQ92945 711 aaKnown RBP eCLIP15.82■□□□□ 0.12
DDX56-201ENST00000258772 TBCBQ99426 244 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 SNRNP25Q9BV90 132 aaKnown RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 FAM124BQ9H5Z6 455 aaPredicted RBP15.82■□□□□ 0.12
DDX56-201ENST00000258772 TXNRD2Q9NNW7 524 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 TAS2R1Q9NYW7 299 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 ERAP1Q9NZ08 941 aa15.82■□□□□ 0.12
DDX56-201ENST00000258772 DNAJC25-GNG10A0A024R161 153 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 IRF6O14896 467 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
DDX56-201ENST00000258772 SDC4P31431 198 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 ABL2P42684 1182 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 SLC6A3Q01959 620 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 BLMHQ13867 455 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 STILQ15468 1287 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 GOLGA7BQ2TAP0 167 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 PPP1R26Q5T8A7 1209 aaPredicted RBP15.81■□□□□ 0.12
DDX56-201ENST00000258772 RINLQ6ZS11 566 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
DDX56-201ENST00000258772 LRRC39Q96DD0 335 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 MECRQ9BV79 373 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 C2CD2Q9Y426 696 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.81■□□□□ 0.12
DDX56-201ENST00000258772 CSADQ9Y600 493 aa15.81■□□□□ 0.12
DDX56-201ENST00000258772 FCHO1O14526 889 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms