RNA–Protein interactions for RNA: YDR027C

VPS54, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS54, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS54YDR027C YMR122W-AQ3E842 84 aa0.57□□□□□ -2.32
VPS54YDR027C RPL38P49167 78 aaKnown RBP0.56□□□□□ -2.32
VPS54YDR027C SDH6Q3E785 79 aa0.56□□□□□ -2.32
VPS54YDR027C ATP18P81450 59 aa0.56□□□□□ -2.32
VPS54YDR027C YBR072C-AQ3E794 53 aa0.56□□□□□ -2.32
VPS54YDR027C RPS30AP0CX33 63 aaKnown RBP0.55□□□□□ -2.32
VPS54YDR027C RPS30BP0CX34 63 aaKnown RBP0.55□□□□□ -2.32
VPS54YDR027C MRPS12P53732 153 aa0.55□□□□□ -2.32
VPS54YDR027C YLR285C-AQ3E771 56 aa0.55□□□□□ -2.32
VPS54YDR027C YMR105W-AQ8TGS8 64 aa0.55□□□□□ -2.32
VPS54YDR027C RPS29BP41058 56 aaKnown RBP0.55□□□□□ -2.32
VPS54YDR027C SPC1P46965 94 aa0.55□□□□□ -2.32
VPS54YDR027C YMR001C-AQ8TGS9 76 aa0.55□□□□□ -2.32
VPS54YDR027C YHR213W-BQ8TGK1 99 aa0.54□□□□□ -2.32
VPS54YDR027C YJR128WP47162 119 aa0.54□□□□□ -2.32
VPS54YDR027C OLI1P61829 76 aa0.54□□□□□ -2.32
VPS54YDR027C SGF11Q03067 99 aa0.54□□□□□ -2.32
VPS54YDR027C YIL156W-BQ2V2P4 73 aa0.54□□□□□ -2.32
VPS54YDR027C YBR200W-AQ3E755 54 aa0.54□□□□□ -2.32
VPS54YDR027C YBL039W-BP0C268 59 aa0.53□□□□□ -2.32
VPS54YDR027C LCL1Q02786 101 aa0.53□□□□□ -2.32
VPS54YDR027C YLR146W-AQ2V2P1 62 aa0.53□□□□□ -2.32
VPS54YDR027C YOR394C-AQ8TGJ0 55 aa0.53□□□□□ -2.32
VPS54YDR027C RPL29P05747 59 aaPredicted RBP0.53□□□□□ -2.32
VPS54YDR027C YLR342W-AQ3E810 57 aa0.53□□□□□ -2.32
VPS54YDR027C YLR157W-DP0CE99 70 aa0.52□□□□□ -2.33
VPS54YDR027C YPR108W-AQ3E7B3 70 aa0.52□□□□□ -2.33
VPS54YDR027C COA2Q3E823 68 aa0.52□□□□□ -2.33
VPS54YDR027C YBR201C-AQ2V2Q3 67 aa0.52□□□□□ -2.33
VPS54YDR027C YPR010C-AA5Z2X5 72 aa0.51□□□□□ -2.33
VPS54YDR027C HHY1P39982 102 aa0.51□□□□□ -2.33
VPS54YDR027C RPL37BP51402 88 aaKnown RBP0.51□□□□□ -2.33
VPS54YDR027C Q0032Q9ZZX7 96 aa0.51□□□□□ -2.33
VPS54YDR027C DDR2P89113 61 aa0.51□□□□□ -2.33
VPS54YDR027C YKL018C-AQ3E7A7 99 aa0.51□□□□□ -2.33
VPS54YDR027C HUG1Q6Q5K6 68 aa0.51□□□□□ -2.33
VPS54YDR027C YNL190WP53872 204 aa0.51□□□□□ -2.33
VPS54YDR027C YDR034C-AP0C289 58 aa0.5□□□□□ -2.33
VPS54YDR027C YFR009W-AP0C5M9 85 aa0.5□□□□□ -2.33
VPS54YDR027C YGL258W-AQ3E740 77 aa0.5□□□□□ -2.33
VPS54YDR027C YOR008C-AQ3E7B9 74 aa0.5□□□□□ -2.33
VPS54YDR027C MVB12P42939 101 aa0.49□□□□□ -2.33
VPS54YDR027C YOR316C-AQ3E806 69 aa0.48□□□□□ -2.33
VPS54YDR027C YHR073W-AP0C5N7 58 aa0.48□□□□□ -2.33
VPS54YDR027C YBR016WP38216 128 aa0.48□□□□□ -2.33
VPS54YDR027C YOR034C-AQ3E735 80 aa0.48□□□□□ -2.33
VPS54YDR027C YGR146C-AQ8TGT9 53 aa0.48□□□□□ -2.33
VPS54YDR027C YBL044WP38194 122 aa0.47□□□□□ -2.33
VPS54YDR027C YOR192C-CQ3E736 78 aa0.47□□□□□ -2.33
VPS54YDR027C TOM7P53507 60 aa0.46□□□□□ -2.34
VPS54YDR027C YJL133C-AQ3E7A3 74 aa0.46□□□□□ -2.34
VPS54YDR027C YLL006W-AQ3E814 58 aa0.46□□□□□ -2.34
VPS54YDR027C RPC10P40422 70 aa0.44□□□□□ -2.34
VPS54YDR027C YOR072W-BQ3E832 53 aa0.44□□□□□ -2.34
VPS54YDR027C YLL066W-BQ8TGJ7 56 aa0.44□□□□□ -2.34
VPS54YDR027C PMP3P87284 55 aa0.43□□□□□ -2.34
VPS54YDR027C YJL127C-BQ3E828 52 aa0.43□□□□□ -2.34
VPS54YDR027C YCR108CQ3E819 63 aa0.42□□□□□ -2.34
VPS54YDR027C YLR157W-EP0CF00 54 aa0.41□□□□□ -2.34
VPS54YDR027C YML054C-AQ3E809 52 aa0.38□□□□□ -2.35
VPS54YDR027C YOL164W-AQ3E7A5 60 aa0.38□□□□□ -2.35
VPS54YDR027C Q0017Q9ZZX8 53 aa0.37□□□□□ -2.35
VPS54YDR027C YHR050W-AQ05451 56 aa0.35□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 31.6 ms