RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W RPS30AP0CX33 63 aaKnown RBP2.6□□□□□ -1.99
SHP1YBL058W RPS30BP0CX34 63 aaKnown RBP2.6□□□□□ -1.99
SHP1YBL058W YLR285C-AQ3E771 56 aa2.6□□□□□ -1.99
SHP1YBL058W YBL044WP38194 122 aa2.59□□□□□ -1.99
SHP1YBL058W EMC6Q12431 108 aa2.59□□□□□ -1.99
SHP1YBL058W YOL013W-AP0C272 63 aaPredicted RBP2.58□□□□□ -2
SHP1YBL058W RPL37AP49166 88 aaKnown RBP2.58□□□□□ -2
SHP1YBL058W YIL156W-BQ2V2P4 73 aa2.58□□□□□ -2
SHP1YBL058W YKL065W-AQ2V2P2 73 aa2.57□□□□□ -2
SHP1YBL058W YIL102CP40488 101 aa2.55□□□□□ -2
SHP1YBL058W OLI1P61829 76 aa2.54□□□□□ -2
SHP1YBL058W RUB1Q03919 77 aa2.54□□□□□ -2
SHP1YBL058W YFL041W-AQ3E817 63 aa2.54□□□□□ -2
SHP1YBL058W SLO1Q3E784 85 aa2.53□□□□□ -2
SHP1YBL058W YSY6P38374 65 aa2.52□□□□□ -2.01
SHP1YBL058W RPS28BP0C0X0 67 aaKnown RBP2.5□□□□□ -2.01
SHP1YBL058W ATX1P38636 73 aa2.5□□□□□ -2.01
SHP1YBL058W RPS28AQ3E7X9 67 aaPredicted RBP2.5□□□□□ -2.01
SHP1YBL058W YFR032C-BQ8TGU2 87 aa2.5□□□□□ -2.01
SHP1YBL058W YHR032W-AP0C5N6 59 aa2.49□□□□□ -2.01
SHP1YBL058W INO4P13902 151 aa2.49□□□□□ -2.01
SHP1YBL058W YHR125WP38831 101 aa2.49□□□□□ -2.01
SHP1YBL058W AIM4P38305 123 aaPredicted RBP2.48□□□□□ -2.01
SHP1YBL058W YFL065CP43539 102 aa2.46□□□□□ -2.02
SHP1YBL058W YPR203WQ08994 102 aa2.46□□□□□ -2.02
SHP1YBL058W YOR314WQ12506 109 aa2.45□□□□□ -2.02
SHP1YBL058W NOP10Q6Q547 58 aaPredicted RBP2.45□□□□□ -2.02
SHP1YBL058W YIR021W-AQ3E739 70 aa2.44□□□□□ -2.02
SHP1YBL058W MRX7P53869 86 aa2.43□□□□□ -2.02
SHP1YBL058W YDR119W-AQ2V2P9 66 aa2.4□□□□□ -2.03
SHP1YBL058W YBR201C-AQ2V2Q3 67 aa2.37□□□□□ -2.03
SHP1YBL058W YPL038W-AQ3E7B4 63 aa2.37□□□□□ -2.03
SHP1YBL058W YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
SHP1YBL058W YML100W-AQ8TGT0 57 aa2.34□□□□□ -2.03
SHP1YBL058W YDR246W-AQ3E763 66 aa2.33□□□□□ -2.04
SHP1YBL058W OST5Q92316 86 aa2.32□□□□□ -2.04
SHP1YBL058W TOM6P33448 61 aa2.3□□□□□ -2.04
SHP1YBL058W YLR412C-AQ3E742 68 aa2.3□□□□□ -2.04
SHP1YBL058W YOR394C-AQ8TGJ0 55 aa2.3□□□□□ -2.04
SHP1YBL058W SBH1P52870 82 aa2.29□□□□□ -2.04
SHP1YBL058W YNL277W-AQ3E7Z0 62 aa2.29□□□□□ -2.04
SHP1YBL058W YDR182W-AQ3E796 67 aa2.28□□□□□ -2.04
SHP1YBL058W SDH6Q3E785 79 aa2.27□□□□□ -2.05
SHP1YBL058W HUB1Q6Q546 73 aa2.19□□□□□ -2.06
SHP1YBL058W YHR086W-AQ3E746 53 aa2.18□□□□□ -2.06
SHP1YBL058W YMR001C-AQ8TGS9 76 aa2.18□□□□□ -2.06
SHP1YBL058W ATP17Q06405 101 aa2.17□□□□□ -2.06
SHP1YBL058W YER188C-AP0C0V2 99 aa2.14□□□□□ -2.07
SHP1YBL058W YOR381W-AQ3E804 55 aa2.14□□□□□ -2.07
SHP1YBL058W YMR122CQ03879 124 aa2.09□□□□□ -2.07
SHP1YBL058W YCR108CQ3E819 63 aa2.05□□□□□ -2.08
SHP1YBL058W YOR072W-BQ3E832 53 aa2.04□□□□□ -2.08
SHP1YBL058W QCR10P37299 77 aa2.03□□□□□ -2.08
SHP1YBL058W YOR376W-AQ3E805 51 aa2.01□□□□□ -2.09
SHP1YBL058W SOM1Q05676 74 aa2□□□□□ -2.09
SHP1YBL058W YCR095W-AQ3E787 52 aa2□□□□□ -2.09
SHP1YBL058W YEL014CP39999 101 aa1.92□□□□□ -2.1
SHP1YBL058W YGL014C-AP0C5N1 53 aa1.8□□□□□ -2.12
SHP1YBL058W HHY1P39982 102 aa1.77□□□□□ -2.13
SHP1YBL058W YHR050W-AQ05451 56 aa1.75□□□□□ -2.13
SHP1YBL058W YBR072C-AQ3E794 53 aa1.64□□□□□ -2.15
SHP1YBL058W YOL164W-AQ3E7A5 60 aa1.33□□□□□ -2.2
SHP1YBL058W YLR157W-EP0CF00 54 aa1.28□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 61.1 ms